RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 AMY2BP19961 511 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 DNM2P50570 870 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 IGBP1P78318 339 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 NFKB2Q00653 900 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 TMEM177Q53S58 311 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 CREB3L3Q68CJ9 461 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 LHFPL2Q6ZUX7 228 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 C16orf59Q7L2K0 433 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 ANKLE2Q86XL3 938 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 DDX42Q86XP3 938 aaKnown RBP eCLIP4.89□□□□□ -1.63
LSM6-205ENST00000507449 ABI1Q8IZP0 508 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 CISD2Q8N5K1 135 aaKnown RBP4.89□□□□□ -1.63
LSM6-205ENST00000507449 LZTR1Q8N653 840 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 PRPF38AQ8NAV1 312 aaKnown RBP4.89□□□□□ -1.63
LSM6-205ENST00000507449 AGBL5Q8NDL9 886 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 NUP43Q8NFH3 380 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 FBXW5Q969U6 566 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 WNK4Q96J92 1243 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 KCNJ15Q99712 375 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 SMURF1Q9HCE7 757 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 PDLIM7Q9NR12 457 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 TAF6LQ9Y6J9 622 aa4.89□□□□□ -1.63
LSM6-205ENST00000507449 NKRFO15226 690 aaKnown RBP eCLIP4.88□□□□□ -1.63
LSM6-205ENST00000507449 NPTXRO95502 500 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 GLI4P10075 376 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 COL6A2P12110 1019 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 PDE6AP16499 860 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 IBSPP21815 317 aaPredicted RBP4.88□□□□□ -1.63
LSM6-205ENST00000507449 FLT3P36888 993 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 EVA1CP58658 441 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 LACTBP83111 547 aaPredicted RBP4.88□□□□□ -1.63
LSM6-205ENST00000507449 DSG1Q02413 1049 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 STRN3Q13033 797 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 DHCR24Q15392 516 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 SLC14A2Q15849 920 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 UBE2R2Q712K3 238 aaPredicted RBP4.88□□□□□ -1.63
LSM6-205ENST00000507449 DDX53Q86TM3 631 aaKnown RBP4.88□□□□□ -1.63
LSM6-205ENST00000507449 RIOX2Q8IUF8 465 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 SPPL2CQ8IUH8 684 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 AHI1Q8N157 1196 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 NXPE1Q8N323 547 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 OXR1Q8N573 874 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 SH3RF2Q8TEC5 729 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 TRMT2BQ96GJ1 504 aaKnown RBP4.88□□□□□ -1.63
LSM6-205ENST00000507449 CCDC120Q96HB5 630 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 NCANO14594 1321 aa4.88□□□□□ -1.63
LSM6-205ENST00000507449 F2P00734 622 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 NTRK1P04629 796 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 HSP90B1P14625 803 aaKnown RBP4.87□□□□□ -1.63
LSM6-205ENST00000507449 BPIP17213 487 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 CDK11BP21127 795 aaKnown RBP4.87□□□□□ -1.63
LSM6-205ENST00000507449 ID4P47928 161 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 JAM2P57087 298 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 ANAPC15P60006 121 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 CT47A1Q5JQC4 288 aaPredicted RBP4.87□□□□□ -1.63
LSM6-205ENST00000507449 FYB2Q5VWT5 728 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 DDX46Q7L014 1031 aaKnown RBP4.87□□□□□ -1.63
LSM6-205ENST00000507449 OTOP1Q7RTM1 612 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 OTOP3Q7RTS5 596 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 OSTM1Q86WC4 334 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 KIF18BQ86Y91 864 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 CHST14Q8NCH0 376 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 PIP4K2CQ8TBX8 421 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.87□□□□□ -1.63
LSM6-205ENST00000507449 MYLIPQ8WY64 445 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 RNF32Q9H0A6 362 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 EPB41L1Q9H4G0 881 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 RC3H2Q9HBD1 1191 aaKnown RBP4.87□□□□□ -1.63
LSM6-205ENST00000507449 TNFRSF12AQ9NP84 129 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 B4GALT6Q9UBX8 382 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 GPR160Q9UJ42 338 aa4.87□□□□□ -1.63
LSM6-205ENST00000507449 B8ZZF3 427 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 NEMP1O14524 444 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 KCNK3O14649 394 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 ZBTB48P10074 688 aaPredicted RBP4.86□□□□□ -1.63
LSM6-205ENST00000507449 GNAT1P11488 350 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 ATP2A2P16615 1042 aaKnown RBP4.86□□□□□ -1.63
LSM6-205ENST00000507449 CYP4F8P98187 520 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 FAM47CQ5HY64 1035 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 MROH9Q5TGP6 573 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 WWC2Q6AWC2 1192 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 CBLL1Q75N03 491 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 SIRT2Q8IXJ6 389 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 LILRA2Q8N149 483 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 SMC1BQ8NDV3 1235 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 FLAD1Q8NFF5 587 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 RXFP1Q9HBX9 757 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 CRTAC1Q9NQ79 661 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 CATSPERZQ9NTU4 200 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 DDX56Q9NY93 547 aaKnown RBP4.86□□□□□ -1.63
LSM6-205ENST00000507449 SIT1Q9Y3P8 196 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 TELO2Q9Y4R8 837 aa4.86□□□□□ -1.63
LSM6-205ENST00000507449 PTPDC1A2A3K4 754 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 MAN2B1O00754 1011 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 RAB11FIP3O75154 756 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 TADA3O75528 432 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 DBHP09172 617 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 PNLIPP16233 465 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 KRT15P19012 456 aa4.85□□□□□ -1.63
LSM6-205ENST00000507449 SDHBP21912 280 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms