RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 RPAP2Q8IXW5 612 aaPredicted RBP10.56□□□□□ -0.72
COPS4-205ENST00000507376 KRI1Q8N9T8 703 aaKnown RBP10.56□□□□□ -0.72
COPS4-205ENST00000507376 AFAP1L1Q8TED9 768 aa10.56□□□□□ -0.72
COPS4-205ENST00000507376 TBC1D5Q92609 795 aa10.56□□□□□ -0.72
COPS4-205ENST00000507376 MRPL38Q96DV4 380 aaKnown RBP10.56□□□□□ -0.72
COPS4-205ENST00000507376 ALG1Q9BT22 464 aa10.56□□□□□ -0.72
COPS4-205ENST00000507376 GPCPD1Q9NPB8 672 aa10.56□□□□□ -0.72
COPS4-205ENST00000507376 GPHNQ9NQX3 736 aaPredicted RBP10.56□□□□□ -0.72
COPS4-205ENST00000507376 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.56□□□□□ -0.72
COPS4-205ENST00000507376 LMCD1Q9NZU5 365 aa10.56□□□□□ -0.72
COPS4-205ENST00000507376 STX8Q9UNK0 236 aa10.56□□□□□ -0.72
COPS4-205ENST00000507376 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.56□□□□□ -0.72
COPS4-205ENST00000507376 APPP05067 770 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 LINC00271P0C7V0 271 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 RPS6P62753 249 aaKnown RBP10.55□□□□□ -0.72
COPS4-205ENST00000507376 PPARAQ07869 468 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 PDE4DQ08499 809 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 CAMK2BQ13554 666 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 COL19A1Q14993 1142 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 RNF135Q8IUD6 432 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 ADHFE1Q8IWW8 467 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 IFNL3Q8IZI9 196 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 ZNF444Q8N0Y2 327 aaPredicted RBP10.55□□□□□ -0.72
COPS4-205ENST00000507376 BANK1Q8NDB2 785 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 DBF4BQ8NFT6 615 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 APPBP2Q92624 585 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 CRBNQ96SW2 442 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 SEZ6LQ9BYH1 1024 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 DCHS1Q96JQ0 3298 aa10.55□□□□□ -0.72
COPS4-205ENST00000507376 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.54□□□□□ -0.72
COPS4-205ENST00000507376 UPP2O95045 317 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 CTSHP09668 335 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 HTRA4P83105 476 aaPredicted RBP10.54□□□□□ -0.72
COPS4-205ENST00000507376 RBL2Q08999 1139 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 HYAL1Q12794 435 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 SYDE2Q5VT97 1194 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 RCSD1Q6JBY9 416 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 CCDC62Q6P9F0 684 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 SEPT14Q6ZU15 432 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 CAGE1Q8TC20 777 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 OTUD7AQ8TE49 926 aaPredicted RBP10.54□□□□□ -0.72
COPS4-205ENST00000507376 SCFD2Q8WU76 684 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 CHURC1Q8WUH1 139 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 PABPC5Q96DU9 382 aaKnown RBP10.54□□□□□ -0.72
COPS4-205ENST00000507376 GTF2IRD1Q9UHL9 959 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 SUPT16HQ9Y5B9 1047 aaKnown RBP10.54□□□□□ -0.72
COPS4-205ENST00000507376 PCDHGC5Q9Y5F6 944 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 MYH6P13533 1939 aa10.54□□□□□ -0.72
COPS4-205ENST00000507376 PLXNA4Q9HCM2 1894 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 GRM6O15303 877 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 RNF113AO15541 343 aaKnown RBP10.53□□□□□ -0.72
COPS4-205ENST00000507376 MBTPS2O43462 519 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 ARP10275 920 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 PSEN2P49810 448 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 RBM10P98175 930 aaKnown RBP10.53□□□□□ -0.72
COPS4-205ENST00000507376 PTPN11Q06124 597 aaPredicted RBP10.53□□□□□ -0.72
COPS4-205ENST00000507376 PDE4BQ07343 736 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 GPM6BQ13491 265 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 LRRFIP1Q32MZ4 808 aaKnown RBP10.53□□□□□ -0.72
COPS4-205ENST00000507376 USH1GQ495M9 461 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 TIGD5Q53EQ6 642 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 HSP90AB4PQ58FF6 505 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 VPS53Q5VIR6 699 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 RNF207Q6ZRF8 634 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 KBTBD3Q8NAB2 608 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 KDM4CQ9H3R0 1056 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 TELO2Q9Y4R8 837 aa10.53□□□□□ -0.72
COPS4-205ENST00000507376 DMDP11532 3685 aa10.52□□□□□ -0.72
COPS4-205ENST00000507376 ABHD14A-ACY1A0A1B0GW23 586 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 PDGFBP01127 241 aaPredicted RBP10.52□□□□□ -0.73
COPS4-205ENST00000507376 GOLGA8HP0CJ92 632 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 SMAD2Q15796 467 aaKnown RBP10.52□□□□□ -0.73
COPS4-205ENST00000507376 HERC4Q5GLZ8 1057 aaPredicted RBP10.52□□□□□ -0.73
COPS4-205ENST00000507376 GIMAP6Q6P9H5 292 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 ADGRD2Q7Z7M1 963 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 SESTD1Q86VW0 696 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 FBXO11Q86XK2 927 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 TMEM192Q8IY95 271 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 GPKOWQ92917 476 aaPredicted RBP eCLIP10.52□□□□□ -0.73
COPS4-205ENST00000507376 NSUN3Q9H649 340 aaKnown RBP10.52□□□□□ -0.73
COPS4-205ENST00000507376 BCAS3Q9H6U6 928 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 ADD3Q9UEY8 706 aaKnown RBP10.52□□□□□ -0.73
COPS4-205ENST00000507376 SYNPO2Q9UMS6 1093 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 RAD50Q92878 1312 aa10.52□□□□□ -0.73
COPS4-205ENST00000507376 TMEM221A6NGB7 291 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 TSPY2A6NKD2 308 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 H3BNC9 293 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 M0R296 226 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 GFRA3O60609 400 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 PLA2G6O60733 806 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 FDX1P10109 184 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 CTNNB1P35222 781 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 KIAA0753Q2KHM9 967 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 CCDC155Q8N6L0 562 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 TAAR1Q96RJ0 339 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 IGFLR1Q9H665 355 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 ZBTB40Q9NUA8 1239 aa10.51□□□□□ -0.73
COPS4-205ENST00000507376 RIF1Q5UIP0 2472 aaKnown RBP10.51□□□□□ -0.73
COPS4-205ENST00000507376 PTPRZ1P23471 2315 aaPredicted RBP10.51□□□□□ -0.73
COPS4-205ENST00000507376 FAM186AA6NE01 2351 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms