RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 ALYREFQ86V81 257 aaKnown RBP6.61□□□□□ -1.35
CLDND1-213ENST00000506927 IQUBQ8NA54 791 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 LPIN2Q92539 896 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 OSBP2Q969R2 916 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 EDC3Q96F86 508 aaKnown RBP6.61□□□□□ -1.35
CLDND1-213ENST00000506927 UBAC1Q9BSL1 405 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 RNF26Q9BY78 433 aaPredicted RBP6.61□□□□□ -1.35
CLDND1-213ENST00000506927 SMG9Q9H0W8 520 aaKnown RBP6.61□□□□□ -1.35
CLDND1-213ENST00000506927 VIPAS39Q9H9C1 493 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 CNNM1Q9NRU3 951 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 CCDC87Q9NVE4 849 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 AATFQ9NY61 560 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLDND1-213ENST00000506927 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
CLDND1-213ENST00000506927 FRRS1LQ9P0K9 344 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 CDC23Q9UJX2 597 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 WWC3Q9ULE0 1092 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 MRFAP1Q9Y605 127 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 C5P01031 1676 aa6.61□□□□□ -1.35
CLDND1-213ENST00000506927 C1orf167Q5SNV9 1468 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CTAGE15A4D2H0 777 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 TRIM75PA6NK02 468 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 USP27XA6NNY8 438 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 FAM177BA6PVY3 158 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 FAM229AH3BQW9 127 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 H3BRB1 525 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 BIN1O00499 593 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 FGFR1OPO95684 399 aaKnown RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 ITGB2P05107 769 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CTAGE8P0CG41 777 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CALML3P27482 149 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 USP5P45974 858 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 SARSP49591 514 aaKnown RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CHMP4BP1P59074 171 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 MORC3Q14149 939 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 NR1I3Q14994 352 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 PTPAQ15257 358 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 PUM3Q15397 648 aaKnown RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 GRIK5Q16478 980 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 ECM1Q16610 540 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 KIF4BQ2VIQ3 1234 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 AKNAD1Q5T1N1 836 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 TRAPPC3LQ5T215 181 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 COL13A1Q5TAT6 717 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CC2D1AQ6P1N0 951 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 XKR5Q6UX68 686 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CYP26C1Q6V0L0 522 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CATIPQ7Z7H3 387 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CTAGE6Q86UF2 777 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 IQCA1Q86XH1 822 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 GLYCTKQ8IVS8 523 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 FAM114A1Q8IWE2 563 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 REXO1L1PQ8IX06 675 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CTAGE4Q8IX94 777 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 TTC16Q8NEE8 873 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CCDC12Q8WUD4 166 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 ESR2Q92731 530 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CDC5LQ99459 802 aaKnown RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 MAP3K14Q99558 947 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CARD6Q9BX69 1037 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 SLC26A6Q9BXS9 759 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 TSGA10Q9BZW7 698 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 TUT1Q9H6E5 874 aaKnown RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 MAGEF1Q9HAY2 307 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 FANCLQ9NW38 375 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 CNTN3Q9P232 1028 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 MAGEC2Q9UBF1 373 aaPredicted RBP6.6□□□□□ -1.35
CLDND1-213ENST00000506927 NFE2L3Q9Y4A8 694 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 PCDHA5Q9Y5H7 936 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 FHOD1Q9Y613 1164 aa6.6□□□□□ -1.35
CLDND1-213ENST00000506927 ALS2Q96Q42 1657 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 PNPLA7Q6ZV29 1317 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 PRAMEF22A3QJZ6 481 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 SPDYE3A6NKU9 549 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 ERVV-1B6SEH8 477 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 H7C1D1 291 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 POLR2DO15514 142 aaKnown RBP6.59□□□□□ -1.35
CLDND1-213ENST00000506927 PDE8AO60658 829 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 PDE8BO95263 885 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 GHRHP01286 108 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 ZNF18P17022 549 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 MARCKSP29966 332 aaPredicted RBP6.59□□□□□ -1.35
CLDND1-213ENST00000506927 KRT2P35908 639 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 LONRF3Q496Y0 759 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 ARL6IP4Q66PJ3 421 aaKnown RBP6.59□□□□□ -1.35
CLDND1-213ENST00000506927 GALNT17Q6IS24 598 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 TRIM65Q6PJ69 517 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 SHC4Q6S5L8 630 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 ZNF662Q6ZS27 426 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 RSRC2Q7L4I2 434 aaKnown RBP6.59□□□□□ -1.35
CLDND1-213ENST00000506927 RASGRP2Q7LDG7 609 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 FAM71BQ8TC56 605 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 STAG1Q8WVM7 1258 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 TTC9Q92623 222 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 PLD4Q96BZ4 506 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 NAPGQ99747 312 aaPredicted RBP6.59□□□□□ -1.35
CLDND1-213ENST00000506927 LUC7LQ9NQ29 371 aaKnown RBP6.59□□□□□ -1.35
CLDND1-213ENST00000506927 TMOD3Q9NYL9 352 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.59□□□□□ -1.35
CLDND1-213ENST00000506927 MAN1B1Q9UKM7 699 aa6.59□□□□□ -1.35
CLDND1-213ENST00000506927 TAF6LQ9Y6J9 622 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms