RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 CERS3Q8IU89 383 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 REXO1Q8N1G1 1221 aaKnown RBP16.61■□□□□ 0.25
HERC6-206ENST00000506714 HPS3Q969F9 1004 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 MTMR9Q96QG7 549 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 SRP68Q9UHB9 627 aaKnown RBP16.61■□□□□ 0.25
HERC6-206ENST00000506714 COL24A1Q17RW2 1714 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 ATAD5Q96QE3 1844 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 GRID2IPA4D2P6 1211 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 CXCR5P32302 372 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 TXKP42681 527 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 SH3RF3Q8TEJ3 882 aaPredicted RBP16.61■□□□□ 0.25
HERC6-206ENST00000506714 GDF3Q9NR23 364 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 CEP72Q9P209 647 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 MTMR7Q9Y216 660 aa16.61■□□□□ 0.25
HERC6-206ENST00000506714 GRIN2DO15399 1336 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 LDHCP07864 332 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 GOLGA8HP0CJ92 632 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 RASA1P20936 1047 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 RASSF7Q02833 373 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 PAK2Q13177 524 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 SEPT2Q15019 361 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 CALCRLQ16602 461 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 TBC1D9BQ66K14 1250 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 LRRC55Q6ZSA7 311 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.6■□□□□ 0.25
HERC6-206ENST00000506714 B4GALNT4Q76KP1 1039 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 SPATS2Q86XZ4 545 aaKnown RBP16.6■□□□□ 0.25
HERC6-206ENST00000506714 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 RBM12Q9NTZ6 932 aaKnown RBP16.6■□□□□ 0.25
HERC6-206ENST00000506714 FAM169AQ9Y6X4 670 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 UBR3Q6ZT12 1888 aa16.6■□□□□ 0.25
HERC6-206ENST00000506714 SERPING1P05155 500 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 NAP1L1P55209 391 aaKnown RBP16.59■□□□□ 0.25
HERC6-206ENST00000506714 GFPT1Q06210 699 aaPredicted RBP16.59■□□□□ 0.25
HERC6-206ENST00000506714 HGSNATQ68CP4 663 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 MREGQ8N565 214 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 TSEN2Q8NCE0 465 aaKnown RBP16.59■□□□□ 0.25
HERC6-206ENST00000506714 RAD54LQ92698 747 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 PNMA5Q96PV4 448 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 HINFPQ9BQA5 517 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 LRRC4BQ9NT99 713 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 SALL4Q9UJQ4 1053 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 ATXN2Q99700 1313 aaKnown RBP16.59■□□□□ 0.25
HERC6-206ENST00000506714 CDK5RAP2Q96SN8 1893 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 ANKRD65E5RJM6 399 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 EHHADHQ08426 723 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 TDRD12Q587J7 1177 aaKnown RBP16.59■□□□□ 0.25
HERC6-206ENST00000506714 SFMBT2Q5VUG0 894 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 AMIGO3Q86WK7 504 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 MICALL1Q8N3F8 863 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 ARHGEF1Q92888 912 aaKnown RBP16.59■□□□□ 0.25
HERC6-206ENST00000506714 MTMR8Q96EF0 704 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 PSMB7Q99436 277 aa16.59■□□□□ 0.25
HERC6-206ENST00000506714 NCK2O43639 380 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 ERLIN2O94905 339 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 RFC4P35249 363 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.25
HERC6-206ENST00000506714 SKIDA1Q1XH10 827 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 TTMPQ5BVD1 217 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 CFAP58Q5T655 872 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 EMC10Q5UCC4 262 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 KRT79Q5XKE5 535 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 DYMQ7RTS9 669 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 CD302Q8IX05 232 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 C1orf131Q8NDD1 294 aaKnown RBP16.58■□□□□ 0.25
HERC6-206ENST00000506714 NEDD1Q8NHV4 660 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.58■□□□□ 0.25
HERC6-206ENST00000506714 ZIM3Q96PE6 472 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 SETDB2Q96T68 719 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 TANGO6Q9C0B7 1094 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 COL4A3BPQ9Y5P4 624 aa16.58■□□□□ 0.25
HERC6-206ENST00000506714 ZEB2O60315 1214 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 GNA14O95837 355 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 SLC1A4P43007 532 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 NAB2Q15742 525 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 TRAPPC3LQ5T215 181 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 SUGP1Q8IWZ8 645 aaKnown RBP16.58■□□□□ 0.24
HERC6-206ENST00000506714 MYOCDQ8IZQ8 938 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 IQCKQ8N0W5 287 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 TGFBRAP1Q8WUH2 860 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 ARL8AQ96BM9 186 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 EYA3Q99504 573 aa16.58■□□□□ 0.24
HERC6-206ENST00000506714 BIN2Q9UBW5 565 aaPredicted RBP16.58■□□□□ 0.24
HERC6-206ENST00000506714 BUB1O43683 1085 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 KCNMA1Q12791 1236 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 ANKRD13CQ8N6S4 541 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 WHAMMQ8TF30 809 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 DDX12PQ92771 950 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 CEP63Q96MT8 703 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 EHD2Q9NZN4 543 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 IRS2Q9Y4H2 1338 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 GTF2A1P52655 376 aaPredicted RBP16.57■□□□□ 0.24
HERC6-206ENST00000506714 SLC27A3Q5K4L6 730 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 KDM7AQ6ZMT4 941 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 MMS22LQ6ZRQ5 1243 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 SLC44A5Q8NCS7 719 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 SMARCAL1Q9NZC9 954 aa16.57■□□□□ 0.24
HERC6-206ENST00000506714 HEXIM1O94992 359 aaKnown RBP16.56■□□□□ 0.24
HERC6-206ENST00000506714 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
HERC6-206ENST00000506714 TMEM119Q4V9L6 283 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms