RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 C16orf59Q7L2K0 433 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 ADAMTS19Q8TE59 1207 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 SCFD2Q8WU76 684 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 PHKBQ93100 1093 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 PDCD2LQ9BRP1 358 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 PPP1R12CQ9BZL4 782 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 AP5M1Q9H0R1 490 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 UPF3AQ9H1J1 476 aaKnown RBP15.07■□□□□ 0
TCOF1-209ENST00000506630 PSTPIP2Q9H939 334 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 GNEQ9Y223 722 aaKnown RBP15.07■□□□□ 0
TCOF1-209ENST00000506630 EYSQ5T1H1 3165 aa15.07■□□□□ 0
TCOF1-209ENST00000506630 RBM47A0AV96 593 aaKnown RBP15.06■□□□□ 0
TCOF1-209ENST00000506630 hCG_1984214I3L0E3 225 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 ARVCFO00192 962 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 DYNC1LI2O43237 492 aaPredicted RBP15.06■□□□□ 0
TCOF1-209ENST00000506630 PPFIA3O75145 1194 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 NR3C2P08235 984 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 ACRP10323 421 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 AK2P54819 239 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 BEX3Q00994 111 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 TTLL4Q14679 1199 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 CCDC85BQ15834 202 aaPredicted RBP15.06■□□□□ 0
TCOF1-209ENST00000506630 UBE2SQ16763 222 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 DUSP28Q4G0W2 176 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 GNASQ5JWF2 1037 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 PPP1R18Q6NYC8 613 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 ZNF713Q8N859 430 aaPredicted RBP15.06■□□□□ 0
TCOF1-209ENST00000506630 OR6J1Q8NGC5 347 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 IL31RAQ8NI17 732 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 IL17RAQ96F46 866 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 ZNF274Q96GC6 653 aaPredicted RBP15.06■□□□□ 0
TCOF1-209ENST00000506630 SLC26A6Q9BXS9 759 aa15.06■□□□□ 0
TCOF1-209ENST00000506630 TSPYL2Q9H2G4 693 aaPredicted RBP15.06■□□□□ 0
TCOF1-209ENST00000506630 STXBP3O00186 592 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 PIK3CDO00329 1044 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 MEIS2O14770 477 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 CPLX1O14810 134 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 EIF3JO75822 258 aaKnown RBP15.05■□□□□ -0
TCOF1-209ENST00000506630 IFNAR1P17181 557 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 CCND2P30279 289 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 ANKRD1Q15327 319 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 PFKFB3Q16875 520 aaPredicted RBP15.05■□□□□ -0
TCOF1-209ENST00000506630 TYW1BQ6NUM6 668 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 FAM126BQ8IXS8 530 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 COPS5Q92905 334 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 UHRF1Q96T88 793 aaPredicted RBP15.05■□□□□ -0
TCOF1-209ENST00000506630 RNF26Q9BY78 433 aaPredicted RBP15.05■□□□□ -0
TCOF1-209ENST00000506630 SLC28A3Q9HAS3 691 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 BARHL2Q9NY43 387 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 FRMPD4Q14CM0 1322 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 PRUNE2Q8WUY3 3088 aa15.05■□□□□ -0
TCOF1-209ENST00000506630 SPDYE3A6NKU9 549 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 NKRFO15226 690 aaKnown RBP eCLIP15.04■□□□□ -0
TCOF1-209ENST00000506630 PRPF3O43395 683 aaKnown RBP15.04■□□□□ -0
TCOF1-209ENST00000506630 ARIH2O95376 493 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 TXNP10599 105 aaKnown RBP15.04■□□□□ -0
TCOF1-209ENST00000506630 SCG2P13521 617 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 ADCY7P51828 1080 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 NEK4P51957 841 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 NTRK3Q16288 839 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 FSCN1Q16658 493 aaKnown RBP15.04■□□□□ -0
TCOF1-209ENST00000506630 CPLX2Q6PUV4 134 aaKnown RBP15.04■□□□□ -0
TCOF1-209ENST00000506630 TRIM22Q8IYM9 498 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 ZFP91Q96JP5 570 aaPredicted RBP15.04■□□□□ -0
TCOF1-209ENST00000506630 C22orf23Q9BZE7 217 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 ALDH8A1Q9H2A2 487 aaPredicted RBP15.04■□□□□ -0
TCOF1-209ENST00000506630 SLKQ9H2G2 1235 aaPredicted RBP15.04■□□□□ -0
TCOF1-209ENST00000506630 IL23AQ9NPF7 189 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 Q9Y3F1 56 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 MRVI1Q9Y6F6 885 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 CDH23Q9H251 3354 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 SCN10AQ9Y5Y9 1956 aa15.04■□□□□ -0
TCOF1-209ENST00000506630 SMCO2A6NFE2 343 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 ZEB2O60315 1214 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 FGBP02675 491 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 CYP2C18P33260 490 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 SCRN1Q12765 414 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 ADGRE1Q14246 886 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 VSIG10LQ86VR7 867 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 HERVK_113Q902F9 699 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 RIC8AQ9NPQ8 531 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 TPCN1Q9ULQ1 816 aa15.03■□□□□ -0
TCOF1-209ENST00000506630 KAT6AQ92794 2004 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 GRIN2DO15399 1336 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 CPT1AP50416 773 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 NKX3-2P78367 333 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 SSRP1Q08945 709 aaKnown RBP15.02■□□□□ -0
TCOF1-209ENST00000506630 PKN1Q16512 942 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 LY6KQ17RY6 165 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 CCDC12Q8WUD4 166 aaPredicted RBP15.02■□□□□ -0
TCOF1-209ENST00000506630 PPP1R13LQ8WUF5 828 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 NKX2-4Q9H2Z4 354 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 HIPK3Q9H422 1215 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 EHMT1Q9H9B1 1298 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 UPF2Q9HAU5 1272 aaKnown RBP15.02■□□□□ -0
TCOF1-209ENST00000506630 RAPGEFL1Q9UHV5 662 aa15.02■□□□□ -0
TCOF1-209ENST00000506630 PFKFB2O60825 505 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 CABYRO75952 493 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 CDKL5O76039 1030 aa15.01□□□□□ -0.01
TCOF1-209ENST00000506630 RGS20O76081 388 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms