RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 A6NJR5 290 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 RFXAPO00287 272 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 TLL1O43897 1013 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 BAIAP3O94812 1187 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 TAP1Q03518 808 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 CTDSPL2Q05D32 466 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 BFSP2Q13515 415 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 SKOR2Q2VWA4 1001 aaPredicted RBP12.36□□□□□ -0.43
CPNE4-206ENST00000505957 HERC6Q8IVU3 1022 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 OR6J1Q8NGC5 347 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 MPHOSPH6Q99547 160 aaKnown RBP12.36□□□□□ -0.43
CPNE4-206ENST00000505957 LY9Q9HBG7 655 aa12.36□□□□□ -0.43
CPNE4-206ENST00000505957 KLF18A0A0U1RQI7 1052 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 NFIBO00712 420 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 NMT2O60551 498 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 KDM4AO75164 1064 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 F13A1P00488 732 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 EDNRBP24530 442 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 HOXD11P31277 338 aaPredicted RBP12.35□□□□□ -0.43
CPNE4-206ENST00000505957 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 CCDC96Q2M329 555 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 FAM47CQ5HY64 1035 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 SYDE2Q5VT97 1194 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 APOA5Q6Q788 366 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 RASGRP2Q7LDG7 609 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 TMEM87AQ8NBN3 555 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 DNERQ8NFT8 737 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 SCFD2Q8WU76 684 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 HLA-CQ95604 372 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 CERS4Q9HA82 394 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 LMCD1Q9NZU5 365 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 ZSWIM5Q9P217 1185 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
CPNE4-206ENST00000505957 GOLGA8BA8MQT2 603 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 B4DLN1 442 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 RANBP6O60518 1105 aaKnown RBP12.34□□□□□ -0.43
CPNE4-206ENST00000505957 CTDNEP1O95476 244 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
CPNE4-206ENST00000505957 MRPL12P52815 198 aaKnown RBP12.34□□□□□ -0.43
CPNE4-206ENST00000505957 PDE4DQ08499 809 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 STK3Q13188 491 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 LARP1BQ659C4 914 aaKnown RBP12.34□□□□□ -0.43
CPNE4-206ENST00000505957 TTBK2Q6IQ55 1244 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 RNF207Q6ZRF8 634 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 CHST3Q7LGC8 479 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 CAGE1Q8TC20 777 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 CLEC4DQ8WXI8 215 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 ARNTL2Q8WYA1 636 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 LRFN3Q9BTN0 628 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 FTOQ9C0B1 505 aaKnown RBP eCLIP12.34□□□□□ -0.43
CPNE4-206ENST00000505957 MAF1Q9H063 256 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 EPHX3Q9H6B9 360 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 INCENPQ9NQS7 918 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 TCP11L1Q9NUJ3 509 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
CPNE4-206ENST00000505957 ERICH2A1L162 156 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
CPNE4-206ENST00000505957 LPXNO60711 386 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 CDKL5O76039 1030 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 ARHGEF15O94989 841 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 PARNO95453 639 aaKnown RBP12.33□□□□□ -0.44
CPNE4-206ENST00000505957 CALML3P27482 149 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 SLC16A2P36021 539 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 RPS6P62753 249 aaKnown RBP12.33□□□□□ -0.44
CPNE4-206ENST00000505957 GRB10Q13322 594 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 WTAPQ15007 396 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 SEC23AQ15436 765 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 TMEM31Q5JXX7 168 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 KRT40Q6A162 431 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 SLC30A10Q6XR72 485 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 SESTD1Q86VW0 696 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 CCDC155Q8N6L0 562 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 AFAP1L1Q8TED9 768 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 TMEM47Q9BQJ4 181 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 NOD1Q9Y239 953 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 HCN4Q9Y3Q4 1203 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 STK36Q9NRP7 1315 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 LCTP09848 1927 aa12.33□□□□□ -0.44
CPNE4-206ENST00000505957 TCF20Q9UGU0 1960 aaKnown RBP12.32□□□□□ -0.44
CPNE4-206ENST00000505957 ZBTB43O43298 467 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 JAK2O60674 1132 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 GPR37L1O60883 481 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 TXNP10599 105 aaKnown RBP12.32□□□□□ -0.44
CPNE4-206ENST00000505957 KCNJ6P48051 423 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 METAP2P50579 478 aaKnown RBP eCLIP12.32□□□□□ -0.44
CPNE4-206ENST00000505957 RBL2Q08999 1139 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 PTGISQ16647 500 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 CCDC178Q5BJE1 867 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 CPLX2Q6PUV4 134 aaKnown RBP12.32□□□□□ -0.44
CPNE4-206ENST00000505957 IQCA1Q86XH1 822 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 UBAC1Q9BSL1 405 aa12.32□□□□□ -0.44
CPNE4-206ENST00000505957 CCDC69A6NI79 296 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 TRAK2O60296 914 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 CXCL10P02778 98 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 SNHG28P0DPA3 235 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 PDHBP11177 359 aa12.31□□□□□ -0.44
CPNE4-206ENST00000505957 WDR5P61964 334 aaKnown RBP12.31□□□□□ -0.44
CPNE4-206ENST00000505957 CCT2P78371 535 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms