RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 TMEM39AQ9NV64 488 aa13.09□□□□□ -0.31
KDM3B-203ENST00000505756 GRIN2DO15399 1336 aa13.09□□□□□ -0.31
KDM3B-203ENST00000505756 LTBP2Q14767 1821 aa13.09□□□□□ -0.31
KDM3B-203ENST00000505756 SMCO2A6NFE2 343 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 FIBPO43427 364 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 CD4P01730 458 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 UBA1P22314 1058 aaKnown RBP13.08□□□□□ -0.32
KDM3B-203ENST00000505756 PSMC6P62333 389 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 CCT2P78371 535 aaKnown RBP13.08□□□□□ -0.32
KDM3B-203ENST00000505756 NLRX1Q86UT6 975 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 PPTC7Q8NI37 304 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 CCDC12Q8WUD4 166 aaPredicted RBP13.08□□□□□ -0.32
KDM3B-203ENST00000505756 PHKBQ93100 1093 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 ZFP91Q96JP5 570 aaPredicted RBP13.08□□□□□ -0.32
KDM3B-203ENST00000505756 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.32
KDM3B-203ENST00000505756 UBE2OQ9C0C9 1292 aaKnown RBP13.08□□□□□ -0.32
KDM3B-203ENST00000505756 NCOA5Q9HCD5 579 aaKnown RBP13.08□□□□□ -0.32
KDM3B-203ENST00000505756 RTEL1Q9NZ71 1219 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 PCDH10Q9P2E7 1040 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 TBX21Q9UL17 535 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 PCDHA6Q9UN73 950 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 PCDHA8Q9Y5H6 950 aa13.08□□□□□ -0.32
KDM3B-203ENST00000505756 RANBP2P49792 3224 aaKnown RBP13.08□□□□□ -0.32
KDM3B-203ENST00000505756 ESYT2A0FGR8 921 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 SPATA31C2B4DYI2 1134 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 GGPS1O95749 300 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 FOSP01100 380 aaPredicted RBP13.07□□□□□ -0.32
KDM3B-203ENST00000505756 RAG1P15918 1043 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 SP2Q02086 613 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 AP3B2Q13367 1082 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 BECN1Q14457 450 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 ANKRD1Q15327 319 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 PKN1Q16512 942 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 DGKDQ16760 1214 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 CELF3Q5SZQ8 465 aaKnown RBP13.07□□□□□ -0.32
KDM3B-203ENST00000505756 MYSM1Q5VVJ2 828 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 BADQ92934 168 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 SLC26A6Q9BXS9 759 aa13.07□□□□□ -0.32
KDM3B-203ENST00000505756 CPLX1O14810 134 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 CD2BP2O95400 341 aaKnown RBP13.06□□□□□ -0.32
KDM3B-203ENST00000505756 CLK2P49760 499 aaKnown RBP13.06□□□□□ -0.32
KDM3B-203ENST00000505756 NEK4P51957 841 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 PTPN11Q06124 597 aaPredicted RBP13.06□□□□□ -0.32
KDM3B-203ENST00000505756 SEMA3FQ13275 785 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 NEDD9Q14511 834 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 HSDL1Q3SXM5 330 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 NFRKBQ6P4R8 1299 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 CPLX2Q6PUV4 134 aaKnown RBP13.06□□□□□ -0.32
KDM3B-203ENST00000505756 TRIM22Q8IYM9 498 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 TDHQ8IZJ6 230 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 CCDC148Q8NFR7 591 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 GPRASP2Q96D09 838 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 CDHR1Q96JP9 859 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 SPATA33Q96N06 139 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 SENP7Q9BQF6 1050 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
KDM3B-203ENST00000505756 ZMYND12Q9H0C1 365 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 MLXIPQ9HAP2 919 aa13.06□□□□□ -0.32
KDM3B-203ENST00000505756 B4GALT4O60513 344 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 PPFIA4O75335 1185 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 TIMP1P01033 207 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 HOXD8P13378 290 aaPredicted RBP13.05□□□□□ -0.32
KDM3B-203ENST00000505756 ITGB5P18084 799 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 ITGB8P26012 769 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 GNA11P29992 359 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 AK2P54819 239 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 SSRP1Q08945 709 aaKnown RBP13.05□□□□□ -0.32
KDM3B-203ENST00000505756 STK3Q13188 491 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 NBPF20Q3BBV1 942 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 MCTP2Q6DN12 878 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 METTL7BQ6UX53 244 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 HSCBQ8IWL3 235 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 GIMAP8Q8ND71 665 aaPredicted RBP13.05□□□□□ -0.32
KDM3B-203ENST00000505756 KATNAL1Q9BW62 490 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 ANO3Q9BYT9 981 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 C6orf50Q9HD87 102 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 UBIAD1Q9Y5Z9 338 aa13.05□□□□□ -0.32
KDM3B-203ENST00000505756 SCN10AQ9Y5Y9 1956 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 K7ELQ4 463 aaPredicted RBP13.04□□□□□ -0.32
KDM3B-203ENST00000505756 NOP56O00567 594 aaKnown RBP13.04□□□□□ -0.32
KDM3B-203ENST00000505756 MAFGO15525 162 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 SORBS3O60504 671 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 PPFIA3O75145 1194 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 CDKL5O76039 1030 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 DEXIO95424 95 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 F2P00734 622 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 SUPT20HL2P0C7V6 817 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 SREBF1P36956 1147 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 FXR1P51114 621 aaKnown RBP eCLIP13.04□□□□□ -0.32
KDM3B-203ENST00000505756 FPGSQ05932 587 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 SCRN1Q12765 414 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 MTMR1Q13613 665 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 FAM47CQ5HY64 1035 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 MFSD5Q6N075 450 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 SESTD1Q86VW0 696 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 BICD2Q8TD16 824 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 KAT2BQ92831 832 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 PGBD1Q96JS3 809 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 TRPV6Q9H1D0 765 aa13.04□□□□□ -0.32
KDM3B-203ENST00000505756 SLKQ9H2G2 1235 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms