RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 FAPQ12884 760 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 PPP2R5DQ14738 602 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 SEPT7Q16181 437 aaKnown RBP5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 MAP9Q49MG5 647 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 TMEM132EQ6IEE7 984 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 ZCCHC8Q6NZY4 707 aaKnown RBP5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 CDH24Q86UP0 819 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 FIBCD1Q8N539 461 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 TMEM145Q8NBT3 493 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 ORAI3Q9BRQ5 295 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 MCOLN1Q9GZU1 580 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 CDH19Q9H159 772 aa5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 NOL6Q9H6R4 1146 aaKnown RBP5.09□□□□□ -1.59
TRAPPC13-208ENST00000505553 BLACEA4D250 179 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 CRTAMO95727 393 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 U2AF1L5P0DN76 240 aaPredicted RBP5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 U2AF1Q01081 240 aaKnown RBP eCLIP5.08□□□□□ -1.61e-6■■□□□ 12.9
TRAPPC13-208ENST00000505553 LRRC41Q15345 812 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 NTRK3Q16288 839 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 RGL3Q3MIN7 710 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 SLC35F1Q5T1Q4 408 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 PIK3R6Q5UE93 754 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 SYDE2Q5VT97 1194 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 STYK1Q6J9G0 422 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 LHFPL2Q6ZUX7 228 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 USP53Q70EK8 1073 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 CNTD1Q8N815 330 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 BRF1Q92994 677 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 HOOK2Q96ED9 719 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZFYVE21Q9BQ24 234 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 YIPF4Q9BSR8 244 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 SLC6A17Q9H1V8 727 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 TMEM59LQ9UK28 342 aa5.08□□□□□ -1.6
TRAPPC13-208ENST00000505553 OTOL1A6NHN0 477 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 NEMP1O14524 444 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 FBXO21O94952 628 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 HPXP02790 462 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 ECI1P42126 302 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 GUCY1A3Q02108 690 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 TNK2Q07912 1038 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 SF1Q15637 639 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 FAM102BQ5T8I3 360 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 NXNQ6DKJ4 435 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 RSPO2Q6UXX9 243 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 TCEAL8Q8IYN2 117 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 TTC8Q8TAM2 541 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 PIWIL2Q8TC59 973 aaKnown RBP5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 MENTQ9BUN1 341 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 DSCC1Q9BVC3 393 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 PRDM14Q9GZV8 571 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 CCDC8Q9H0W5 538 aaPredicted RBP5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 SAMD15Q9P1V8 674 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 TRHDEQ9UKU6 1024 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 MYRFQ9Y2G1 1151 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 COMMD10Q9Y6G5 202 aa5.07□□□□□ -1.6
TRAPPC13-208ENST00000505553 TEX51A0A1B0GUA7 166 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 RFPL1O75677 317 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 HK2P52789 917 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 POU4F1Q01851 419 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 OCRLQ01968 901 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 GFOD2Q3B7J2 385 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 IQSEC1Q6DN90 963 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 PPP4R4Q6NUP7 873 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 TMPRSS7Q7RTY8 843 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 C14orf80Q86SX3 495 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZNF605Q86T29 641 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 MTDHQ86UE4 582 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 C1orf159Q96HA4 380 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZDHHC15Q96MV8 337 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 ASCC2Q9H1I8 757 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 ARNT2Q9HBZ2 717 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZNF180Q9UJW8 692 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZKSCAN5Q9Y2L8 839 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 GPR55Q9Y2T6 319 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 TRAF6Q9Y4K3 522 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 PCDHA9Q9Y5H5 950 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 GABRDO14764 452 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 GAS7O60861 476 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 ULK1O75385 1050 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 F2P00734 622 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 INSRRP14616 1297 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 IL2P60568 153 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 EFEMP1Q12805 493 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 PUM1Q14671 1186 aaKnown RBP eCLIP5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 MLC1Q15049 377 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 BRD3Q15059 726 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 CWF19L1Q69YN2 538 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 C11orf74Q86VG3 221 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 CREG2Q8IUH2 290 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 IFNL3Q8IZI9 196 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 FAM9AQ8IZU1 332 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 SAMD3Q8N6K7 520 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 ZNF526Q8TF50 670 aaPredicted RBP5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 TRIT1Q9H3H1 467 aaKnown RBP5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 CABP5Q9NP86 173 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 GFOD1Q9NXC2 390 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 KCNH3Q9ULD8 1083 aa5.06□□□□□ -1.6
TRAPPC13-208ENST00000505553 MYOCOSA0A1B0GUC4 107 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 CBX4O00257 560 aa5.05□□□□□ -1.6
TRAPPC13-208ENST00000505553 VAMP4O75379 141 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms