RNA–Protein interactions for RNA: ENST00000505392.5

CCHCR1-219, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 547 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-219ENST00000505392 PLEKHG4Q58EX7 1191 aa13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 HERC4Q5GLZ8 1057 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 RPAINQ86UA6 219 aa13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 FBXO11Q86XK2 927 aa13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 RNF135Q8IUD6 432 aa13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 SYTL5Q8TDW5 730 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 RMDN3Q96TC7 470 aa13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 UBA5Q9GZZ9 404 aa13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 TCP11L1Q9NUJ3 509 aa13.57□□□□□ -0.24
CCHCR1-219ENST00000505392 MBTPS2O43462 519 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 ST18O60284 1047 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 PPFIA4O75335 1185 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 EIF3JO75822 258 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 CTC1Q2NKJ3 1217 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 VPS53Q5VIR6 699 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 ARHGEF16Q5VV41 709 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 PRSS33Q8NF86 280 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 PPTC7Q8NI37 304 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 SEPT8Q92599 483 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 EDAQ92838 391 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 EMID1Q96A84 441 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 TTC14Q96N46 770 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 POP1Q99575 1024 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 CPVLQ9H3G5 476 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 DCTPP1Q9H773 170 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 COL20A1Q9P218 1284 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 MRVI1Q9Y6F6 885 aa13.56□□□□□ -0.24
CCHCR1-219ENST00000505392 GOLGA8HP0CJ92 632 aa13.55□□□□□ -0.24
CCHCR1-219ENST00000505392 BMP8AQ7Z5Y6 402 aa13.55□□□□□ -0.24
CCHCR1-219ENST00000505392 SERINC5Q86VE9 423 aa13.55□□□□□ -0.24
CCHCR1-219ENST00000505392 PBXIP1Q96AQ6 731 aa13.55□□□□□ -0.24
CCHCR1-219ENST00000505392 OSBPL7Q9BZF2 842 aa13.55□□□□□ -0.24
CCHCR1-219ENST00000505392 IGFLR1Q9H665 355 aa13.55□□□□□ -0.24
CCHCR1-219ENST00000505392 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 STXBP3O00186 592 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 SORBS3O60504 671 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 NR3C2P08235 984 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 SNHG28P0DPA3 235 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 EIF2AK2P19525 551 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 PTPN5P54829 565 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 HYAL1Q12794 435 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 MCF2L2Q86YR7 1114 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 FIBCD1Q8N539 461 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 ATP6V0A1Q93050 837 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 IL17RAQ96F46 866 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 IFIH1Q9BYX4 1025 aaKnown RBP13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 MAF1Q9H063 256 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 SIP14410 1827 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 TTC41PQ6P2S7 1318 aa13.54□□□□□ -0.24
CCHCR1-219ENST00000505392 C17orf102A2RUQ5 167 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 GRM6O15303 877 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 FGAP02671 866 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 RB1P06400 928 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 CTNNB1P35222 781 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 GTF2F1P35269 517 aaKnown RBP eCLIP13.53□□□□□ -0.249e-12■■■■□ 26
CCHCR1-219ENST00000505392 BMPR1AP36894 532 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 ALX1Q15699 326 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 HSDL1Q3SXM5 330 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 GPATCH4Q5T3I0 446 aaKnown RBP13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 MYSM1Q5VVJ2 828 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 TRIM67Q6ZTA4 783 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 PI4K2BQ8TCG2 481 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 SPATA33Q96N06 139 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 ABCB11O95342 1321 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 TRIOO75962 3097 aa13.53□□□□□ -0.24
CCHCR1-219ENST00000505392 C5orf42Q9H799 3197 aa13.52□□□□□ -0.24
CCHCR1-219ENST00000505392 TMEM221A6NGB7 291 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 C5orf67F2Z3F1 127 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 M0R296 226 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 TREHO43280 583 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 CSPG5O95196 566 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 SMAD4Q13485 552 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 PKN1Q16512 942 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 CDC37Q16543 378 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 CELF3Q5SZQ8 465 aaKnown RBP13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 PRRX2Q99811 253 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 LMAN2LQ9H0V9 348 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 RNPEPQ9H4A4 650 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 PXMP2Q9NR77 195 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 CD207Q9UJ71 328 aa13.52□□□□□ -0.25
CCHCR1-219ENST00000505392 H3BRB1 525 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 LINC01565O15544 149 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 GGPS1O95749 300 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 CFBP00751 764 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 CTSHP09668 335 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 HSPD1P10809 573 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 MYCLP12524 364 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 HOXD8P13378 290 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 TCF15Q12870 199 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 ADAM15Q13444 863 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 SUGP1Q8IWZ8 645 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 ADGRF4Q8IZF3 695 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 OTUD7AQ8TE49 926 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 ZKSCAN3Q9BRR0 538 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 C11orf84Q9BUA3 381 aaPredicted RBP13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 TUT1Q9H6E5 874 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 MLXIPQ9HAP2 919 aa13.51□□□□□ -0.25
CCHCR1-219ENST00000505392 VAT1LQ9HCJ6 419 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 134.4 ms