RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 RFXAPO00287 272 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 STAM2O75886 525 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 BMP1P13497 986 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 SEC23AQ15436 765 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 GNPTABQ3T906 1256 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 MYSM1Q5VVJ2 828 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 STAG2Q8N3U4 1231 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 HLA-CQ95604 372 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 MAD2L2Q9UI95 211 aa12.88□□□□□ -0.35
UBE2D3-219ENST00000505207 VCANP13611 3396 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 PNMA6FA0A0J9YX94 578 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 NOP56O00567 594 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 GGPS1O95749 300 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 GNAT1P11488 350 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 HOXD8P13378 290 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 WTAPQ15007 396 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 PGM5Q15124 567 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 CATIPQ7Z7H3 387 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 FCHSD1Q86WN1 690 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 HOMER1Q86YM7 354 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 C1QTNF1Q9BXJ1 281 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 RIOX1Q9H6W3 641 aa12.87□□□□□ -0.35
UBE2D3-219ENST00000505207 C17orf102A2RUQ5 167 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 NBNO60934 754 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 LGR5O75473 907 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 GJB5O95377 273 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 AMHP03971 560 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 ZNF286BP0CG31 522 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 COL9A1P20849 921 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 HOXA13P31271 388 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 GRB10Q13322 594 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 NEDD9Q14511 834 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 GRM4Q14833 912 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 CYB5R4Q7L1T6 521 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 CUL5Q93034 780 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 TGS1Q96RS0 853 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 CTAGE1Q96RT6 745 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 USP26Q9BXU7 913 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 INSL6Q9Y581 213 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 GBF1Q92538 1859 aa12.86□□□□□ -0.35
UBE2D3-219ENST00000505207 SCN5AQ14524 2016 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 RSPH10B2B2RC85 870 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 H3BRB1 525 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 OPLAHO14841 1288 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 CAND2O75155 1236 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 RSPH10BP0C881 870 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 KIF5BP33176 963 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 THPOP40225 353 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 ERVK-21P61565 698 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 TFF2Q03403 129 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 GPNMBQ14956 572 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 HSDL1Q3SXM5 330 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 ZNF618Q5T7W0 954 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 TTC22Q5TAA0 569 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 XRRA1Q6P2D8 792 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 SERINC5Q86VE9 423 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 ATP6V0A1Q93050 837 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 PIGSQ96S52 555 aa12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 TUT1Q9H6E5 874 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 PRRC2BQ5JSZ5 2229 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-219ENST00000505207 LAMA4Q16363 1823 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 TRIP12Q14669 1992 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 EPOPA6NHQ4 379 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 PPP1R11O60927 126 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 RGS20O76081 388 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 UBA1P22314 1058 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 DEFB103AP81534 67 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 TRIM71Q2Q1W2 868 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 TMTC2Q8N394 836 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 GIMAP8Q8ND71 665 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 CTCFLQ8NI51 663 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 SEPT8Q92599 483 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 MAP3K14Q99558 947 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 LZTS2Q9BRK4 669 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 ZNF215Q9UL58 517 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 MYH6P13533 1939 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 KIAA1217Q5T5P2 1943 aa12.84□□□□□ -0.35
UBE2D3-219ENST00000505207 TANC1Q9C0D5 1861 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 FIBPO43427 364 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 SORBS3O60504 671 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 CYP21A2P08686 494 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 SMARCA1P28370 1054 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 ICAM3P32942 547 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 GNAQP50148 359 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 KCNQ1P51787 676 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 ZNF200P98182 395 aaPredicted RBP12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 SP2Q02086 613 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 TROAPQ12815 778 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 PTPROQ16827 1216 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 METTL7BQ6UX53 244 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 NLRX1Q86UT6 975 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 SMARCC2Q8TAQ2 1214 aa12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 RRP36Q96EU6 259 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-219ENST00000505207 SAMD11Q96NU1 681 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms