RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 MXRA8Q9BRK3 442 aa11.64□□□□□ -0.55
RFC1-210ENST00000505077 JADE2Q9NQC1 790 aa11.64□□□□□ -0.55
RFC1-210ENST00000505077 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.64□□□□□ -0.55
RFC1-210ENST00000505077 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.64□□□□□ -0.55
RFC1-210ENST00000505077 TRIM17Q9Y577 477 aa11.64□□□□□ -0.55
RFC1-210ENST00000505077 MYH11P35749 1972 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 FAM86B1E9PN63 330 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 ADCY3O60266 1144 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 TDP2O95551 362 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 YEATS4O95619 227 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 FAM86B2P0C5J1 330 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 ITGB5P18084 799 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 PRPHP41219 470 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 NASPP49321 788 aaPredicted RBP11.63□□□□□ -0.55
RFC1-210ENST00000505077 CAP1Q01518 475 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 ANO1Q5XXA6 986 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 ARL6IP4Q66PJ3 421 aaKnown RBP11.63□□□□□ -0.55
RFC1-210ENST00000505077 CTU1Q7Z7A3 348 aaKnown RBP11.63□□□□□ -0.55
RFC1-210ENST00000505077 SLFN12Q8IYM2 578 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 LENG9Q96B70 501 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 FAM20AQ96MK3 541 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 SENP7Q9BQF6 1050 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 SCAND2PQ9GZW5 306 aaPredicted RBP11.63□□□□□ -0.55
RFC1-210ENST00000505077 KCNMB3Q9NPA1 279 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 RTEL1Q9NZ71 1219 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 GABRQQ9UN88 632 aa11.63□□□□□ -0.55
RFC1-210ENST00000505077 KIAA0100Q14667 2235 aaKnown RBP11.63□□□□□ -0.55
RFC1-210ENST00000505077 RBM47A0AV96 593 aaKnown RBP11.62□□□□□ -0.55
RFC1-210ENST00000505077 SPATA31C2B4DYI2 1134 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 OR52Z1P0C646 297 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 MCM7P33993 719 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 ATP2C1P98194 919 aaPredicted RBP11.62□□□□□ -0.55
RFC1-210ENST00000505077 TTLL4Q14679 1199 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 CALCRLQ16602 461 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 CCL14Q16627 93 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 CSPP1Q1MSJ5 1256 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 PRR16Q569H4 304 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 FOXD4L5Q5VV16 416 aaPredicted RBP11.62□□□□□ -0.55
RFC1-210ENST00000505077 CLEC17AQ6ZS10 378 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 PLA2G4DQ86XP0 818 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 KCNG4Q8TDN1 519 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 FOXD4L4Q8WXT5 416 aaPredicted RBP11.62□□□□□ -0.55
RFC1-210ENST00000505077 TRIB2Q92519 343 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 RIT2Q99578 217 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 KATNBL1Q9H079 304 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 PRDM10Q9NQV6 1147 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 KCNH7Q9NS40 1196 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 FLRT1Q9NZU1 646 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 TCEAL9Q9UHQ7 104 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 PTPN22Q9Y2R2 807 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 PCDHB6Q9Y5E3 794 aa11.62□□□□□ -0.55
RFC1-210ENST00000505077 NFASCO94856 1347 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 IPO5O00410 1097 aaKnown RBP11.61□□□□□ -0.55
RFC1-210ENST00000505077 STK25O00506 426 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 NKRFO15226 690 aaKnown RBP eCLIP11.61□□□□□ -0.55
RFC1-210ENST00000505077 SLC37A4O43826 429 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 EDIL3O43854 480 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 RGS20O76081 388 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 BAG4O95429 457 aaKnown RBP11.61□□□□□ -0.55
RFC1-210ENST00000505077 SNAI1O95863 264 aaPredicted RBP11.61□□□□□ -0.55
RFC1-210ENST00000505077 CYBAP13498 195 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 GRK4P32298 578 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 LBX1P52954 281 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 NUBP1P53384 320 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 DNM1Q05193 864 aaKnown RBP11.61□□□□□ -0.55
RFC1-210ENST00000505077 PTGDRQ13258 359 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 ACVR2BQ13705 512 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 SLC39A14Q15043 492 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 SF3A1Q15459 793 aaKnown RBP11.61□□□□□ -0.55
RFC1-210ENST00000505077 TMEM266Q2M3C6 531 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 MAP3K21Q5TCX8 1036 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 FBXO16Q8IX29 292 aaPredicted RBP11.61□□□□□ -0.55
RFC1-210ENST00000505077 ETNPPLQ8TBG4 499 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 SLC5A5Q92911 643 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 TNPO1Q92973 898 aaKnown RBP11.61□□□□□ -0.55
RFC1-210ENST00000505077 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 GBP4Q96PP9 640 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 USP28Q96RU2 1077 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 ZNF577Q9BSK1 485 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 RAB34Q9BZG1 259 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 WDR11Q9BZH6 1224 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 TBC1D22BQ9NU19 505 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 MRVI1Q9Y6F6 885 aa11.61□□□□□ -0.55
RFC1-210ENST00000505077 ELP1O95163 1332 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 SCN10AQ9Y5Y9 1956 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 MSH4O15457 936 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 PPP6R2O75170 966 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 ATP2B1P20020 1258 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 CYP2C19P33261 490 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 NEDD9Q14511 834 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 STK38Q15208 465 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 PTPAQ15257 358 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 ZNF174Q15697 407 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 IQSEC1Q6DN90 963 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 TAPT1Q6NXT6 567 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 FAM173BQ6P4H8 233 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 SEPT14Q6ZU15 432 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 HOMEZQ8IX15 550 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 CYP2W1Q8TAV3 490 aa11.6□□□□□ -0.55
RFC1-210ENST00000505077 EMID1Q96A84 441 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms