RNA–Protein interactions for RNA: ENST00000505066.5

DDR1-256, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-256	ENST00000505066	PTH1R	Q03431	593 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	XRRA1	Q6P2D8	792 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	NLRX1	Q86UT6	975 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	MAP3K14	Q99558	947 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	MTA3	Q9BTC8	594 aa		18.9	■□□□□ 0.62
DDR1-256	ENST00000505066	LRRC37A2	A6NM11	1700 aa		18.89	■□□□□ 0.61
DDR1-256	ENST00000505066	C17orf102	A2RUQ5	167 aa		18.89	■□□□□ 0.61
DDR1-256	ENST00000505066	F2	P00734	622 aa		18.89	■□□□□ 0.61
DDR1-256	ENST00000505066	RNF20	Q5VTR2	975 aa		18.89	■□□□□ 0.61
DDR1-256	ENST00000505066	MYSM1	Q5VVJ2	828 aa		18.89	■□□□□ 0.61
DDR1-256	ENST00000505066	ARNTL2	Q8WYA1	636 aa		18.89	■□□□□ 0.61
DDR1-256	ENST00000505066	USP26	Q9BXU7	913 aa		18.89	■□□□□ 0.61
DDR1-256	ENST00000505066	EHMT1	Q9H9B1	1298 aa		18.89	■□□□□ 0.61
DDR1-256	ENST00000505066	SORBS3	O60504	671 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	CKB	P12277	381 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	MYOG	P15173	224 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	USP38	Q8NB14	1042 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	KAT2B	Q92831	832 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	MAP4K1	Q92918	833 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	CDHR1	Q96JP9	859 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	TMEM87B	Q96K49	555 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	ASB2	Q96Q27	587 aa		18.88	■□□□□ 0.61
DDR1-256	ENST00000505066	RBM8A	Q9Y5S9	174 aa	Known RBP	18.88	■□□□□ 0.61
DDR1-256	ENST00000505066		H3BRB1	525 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	TNFRSF10A	O00220	468 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	FIBP	O43427	364 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	PRC1	O43663	620 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	UBA1	P22314	1058 aa	Known RBP	18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	SMARCA1	P28370	1054 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	IRX6	P78412	446 aa	Predicted RBP	18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	TROAP	Q12815	778 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	ZNF654	Q8IZM8	581 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	SPZ1	Q9BXG8	430 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	TUT1	Q9H6E5	874 aa	Known RBP	18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	COL6A3	P12111	3177 aa		18.87	■□□□□ 0.61
DDR1-256	ENST00000505066	RSPH10B2	B2RC85	870 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	PPP1R11	O60927	126 aa	Predicted RBP	18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	AMH	P03971	560 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	RSPH10B	P0C881	870 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	THPO	P40225	353 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	RBL2	Q08999	1139 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	ADGRE1	Q14246	886 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	HSDL1	Q3SXM5	330 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	ATP6V0A1	Q93050	837 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	CERS4	Q9HA82	394 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	SLC12A7	Q9Y666	1083 aa		18.86	■□□□□ 0.61
DDR1-256	ENST00000505066	SPDYE3	A6NKU9	549 aa		18.85	■□□□□ 0.61
DDR1-256	ENST00000505066	OPLAH	O14841	1288 aa		18.85	■□□□□ 0.61
DDR1-256	ENST00000505066	WDR5	P61964	334 aa	Known RBP	18.85	■□□□□ 0.61
DDR1-256	ENST00000505066	METTL7B	Q6UX53	244 aa		18.85	■□□□□ 0.61
DDR1-256	ENST00000505066	TNPO1	Q92973	898 aa	Known RBP	18.85	■□□□□ 0.61
DDR1-256	ENST00000505066	RAD9A	Q99638	391 aa		18.85	■□□□□ 0.61
DDR1-256	ENST00000505066	IL25	Q9H293	177 aa		18.85	■□□□□ 0.61
DDR1-256	ENST00000505066	COG5	Q9UP83	839 aa		18.85	■□□□□ 0.61
DDR1-256	ENST00000505066	HAS3	O00219	553 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	CAND2	O75155	1236 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	LGR5	O75473	907 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	CYFIP1	Q7L576	1253 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	RSPH3	Q86UC2	560 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	IGDCC4	Q8TDY8	1250 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	SEPT8	Q92599	483 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	PSTPIP2	Q9H939	334 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	ANO2	Q9NQ90	1003 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	RTEL1	Q9NZ71	1219 aa		18.84	■□□□□ 0.61
DDR1-256	ENST00000505066	CXCL10	P02778	98 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	LGALS2	P05162	132 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	HOXD8	P13378	290 aa	Predicted RBP	18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	ICAM3	P32942	547 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	ZNF618	Q5T7W0	954 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	PCNX4	Q63HM2	1172 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	MB21D2	Q8IYB1	491 aa	Predicted RBP	18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	IL31RA	Q8NI17	732 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	ADAMTS19	Q8TE59	1207 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	INPP4A	Q96PE3	977 aa	Predicted RBP	18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	UHRF1	Q96T88	793 aa	Predicted RBP	18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	PRDM6	Q9NQX0	595 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	LAMA4	Q16363	1823 aa		18.83	■□□□□ 0.6
DDR1-256	ENST00000505066	SPATA31C2	B4DYI2	1134 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	CYTH3	O43739	400 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	RGS20	O76081	388 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	SMIM10L2A	P0DMW4	78 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	SMIM10L2B	P0DMW5	78 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	SP4	Q02446	784 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	TAP1	Q03518	808 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	UTP14C	Q5TAP6	766 aa	Known RBP	18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	SERINC5	Q86VE9	423 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	ZFP91	Q96JP5	570 aa	Predicted RBP	18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	TGS1	Q96RS0	853 aa	Known RBP	18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	SENP7	Q9BQF6	1050 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	LY9	Q9HBG7	655 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	INSL6	Q9Y581	213 aa		18.82	■□□□□ 0.6
DDR1-256	ENST00000505066	PIK3CD	O00329	1044 aa		18.81	■□□□□ 0.6
DDR1-256	ENST00000505066	LIFR	P42702	1097 aa		18.81	■□□□□ 0.6
DDR1-256	ENST00000505066	FGD1	P98174	961 aa		18.81	■□□□□ 0.6
DDR1-256	ENST00000505066	FAM117B	Q6P1L5	589 aa		18.81	■□□□□ 0.6
DDR1-256	ENST00000505066	DHX38	Q92620	1227 aa	Known RBP	18.81	■□□□□ 0.6
DDR1-256	ENST00000505066	C16orf70	Q9BSU1	422 aa		18.81	■□□□□ 0.6
DDR1-256	ENST00000505066	MYL10	Q9BUA6	226 aa		18.81	■□□□□ 0.6
DDR1-256	ENST00000505066	LMCD1	Q9NZU5	365 aa		18.81	■□□□□ 0.6

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