RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 RANBP17Q9H2T7 1088 aaKnown RBP10.05□□□□□ -0.8
CDH6-202ENST00000504835 TSPY2A6NKD2 308 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 NFIBO00712 420 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 SLC3A2P08195 630 aaKnown RBP10.05□□□□□ -0.8
CDH6-202ENST00000504835 SLC16A2P36021 539 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 RAB30Q15771 203 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 CCDC85BQ15834 202 aaPredicted RBP10.05□□□□□ -0.8
CDH6-202ENST00000504835 BTNL9Q6UXG8 535 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 NSMFQ6X4W1 530 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 RNF19BQ6ZMZ0 732 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 PPP1R13LQ8WUF5 828 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 HPS1Q92902 700 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 AP5M1Q9H0R1 490 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 ALDH8A1Q9H2A2 487 aaPredicted RBP10.05□□□□□ -0.8
CDH6-202ENST00000504835 VTA1Q9NP79 307 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 TRMT13Q9NUP7 481 aaKnown RBP10.05□□□□□ -0.8
CDH6-202ENST00000504835 THEGQ9P2T0 379 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 MSRAQ9UJ68 235 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 ANAPC4Q9UJX5 808 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 CCPG1Q9ULG6 757 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 Q9Y3F1 56 aa10.05□□□□□ -0.8
CDH6-202ENST00000504835 SIP14410 1827 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 RBM47A0AV96 593 aaKnown RBP10.04□□□□□ -0.8
CDH6-202ENST00000504835 ICAM1P05362 532 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 FGRP09769 529 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 CYP2C9P11712 490 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 MMP16P51512 607 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 ALDH5A1P51649 535 aaPredicted RBP10.04□□□□□ -0.8
CDH6-202ENST00000504835 BAATQ14032 418 aaPredicted RBP10.04□□□□□ -0.8
CDH6-202ENST00000504835 TTLL4Q14679 1199 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 DUSP28Q4G0W2 176 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 SLC30A10Q6XR72 485 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 KIAA1211Q6ZU35 1233 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 ATXN2LQ8WWM7 1075 aaKnown RBP10.04□□□□□ -0.8
CDH6-202ENST00000504835 CLEC4DQ8WXI8 215 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 ASB2Q96Q27 587 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 RAPGEFL1Q9UHV5 662 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 BRWD1Q9NSI6 2320 aa10.04□□□□□ -0.8
CDH6-202ENST00000504835 FRMPD2Q68DX3 1309 aaPredicted RBP10.03□□□□□ -0.8
CDH6-202ENST00000504835 RBAK-RBAKDNI3L0D1 243 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 ERC2O15083 957 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 ORC4O43929 436 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 ZEB2O60315 1214 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 MX1P20591 662 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 IGFBP4P22692 258 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 PURAQ00577 322 aaKnown RBP10.03□□□□□ -0.8
CDH6-202ENST00000504835 CCDC96Q2M329 555 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 LRRFIP1Q32MZ4 808 aaKnown RBP10.03□□□□□ -0.8
CDH6-202ENST00000504835 ADAMTS19Q8TE59 1207 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 DCAF4Q8WV16 495 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 TMEM47Q9BQJ4 181 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 SLC28A3Q9HAS3 691 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 NXF1Q9UBU9 619 aaKnown RBP10.03□□□□□ -0.8
CDH6-202ENST00000504835 DOCK5Q9H7D0 1870 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 MICAL3Q7RTP6 2002 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 TNKSO95271 1327 aa10.03□□□□□ -0.8
CDH6-202ENST00000504835 RANBP6O60518 1105 aaKnown RBP10.02□□□□□ -0.81
CDH6-202ENST00000504835 ARHGEF15O94989 841 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 SYDE2Q5VT97 1194 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 COPS5Q92905 334 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 SEZ6LQ9BYH1 1024 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 WDR11Q9BZH6 1224 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 MTIF3Q9H2K0 278 aaKnown RBP10.02□□□□□ -0.81
CDH6-202ENST00000504835 GPCPD1Q9NPB8 672 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 PCDHA11Q9Y5I1 949 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 SLC4A7Q9Y6M7 1214 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 ATG2AQ2TAZ0 1938 aa10.02□□□□□ -0.81
CDH6-202ENST00000504835 A0A0D9SFI3 127 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 EPOPA6NHQ4 379 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 RFXAPO00287 272 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 MYL3P08590 195 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 PDHBP11177 359 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 EDNRBP24530 442 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 MRPS5P82675 430 aaKnown RBP10.01□□□□□ -0.81
CDH6-202ENST00000504835 ALX1Q15699 326 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 NPAS3Q8IXF0 933 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 RPUSD2Q8IZ73 545 aaKnown RBP10.01□□□□□ -0.81
CDH6-202ENST00000504835 ZSCAN1Q8NBB4 408 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 IRF7Q92985 503 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 FAM227BQ96M60 508 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 NECAB3Q96P71 396 aaPredicted RBP10.01□□□□□ -0.81
CDH6-202ENST00000504835 NLRC5Q86WI3 1866 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 PTPDC1A2A3K4 754 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 ZBBXA8MT70 800 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 ARIH2O95376 493 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 FGAP02671 866 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 TOP1P11387 765 aaKnown RBP10.01□□□□□ -0.81
CDH6-202ENST00000504835 ATP2A2P16615 1042 aaKnown RBP10.01□□□□□ -0.81
CDH6-202ENST00000504835 CALML3P27482 149 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 NBPF20Q3BBV1 942 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 DEFB128Q7Z7B8 93 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 OR6J1Q8NGC5 347 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 MTG1Q9BT17 334 aaPredicted RBP10.01□□□□□ -0.81
CDH6-202ENST00000504835 TCP11L1Q9NUJ3 509 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 POLR3EQ9NVU0 708 aa10.01□□□□□ -0.81
CDH6-202ENST00000504835 ADD3Q9UEY8 706 aaKnown RBP10.01□□□□□ -0.81
CDH6-202ENST00000504835 BAZ2BQ9UIF8 2168 aaKnown RBP10□□□□□ -0.81
CDH6-202ENST00000504835 LOC102724159A0A0B4J2E5 919 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms