RNA–Protein interactions for RNA: ENST00000504243.5

TRAPPC13-205, Transcript of trafficking protein particle complex 13, humanhuman

TSL 5

Gene TRAPPC13, Length 643 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-205ENST00000504243 COA3Q9Y2R0 106 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-205ENST00000504243 CCDC66A2RUB6 948 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 OR14I1A6ND48 311 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 C22orf46C9J442 243 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 M0R2C6 588 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 ARVCFO00192 962 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 PYGMP11217 842 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 FPR2P25090 351 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 SCNN1BP51168 640 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 CRY1Q16526 586 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 CISD2Q8N5K1 135 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 LZTR1Q8N653 840 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 FBXO15Q8NCQ5 510 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 DPF3Q92784 378 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 USP7Q93009 1102 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 FAM84AQ96KN4 292 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 DIRC2Q96SL1 478 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 CABP5Q9NP86 173 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 DCP1AQ9NPI6 582 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 FBXL7Q9UJT9 491 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 ZKSCAN5Q9Y2L8 839 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 ATP8A1Q9Y2Q0 1164 aa6.85□□□□□ -1.31
TRAPPC13-205ENST00000504243 GNAT1P11488 350 aa6.84□□□□□ -1.31
TRAPPC13-205ENST00000504243 KRT15P19012 456 aa6.84□□□□□ -1.31
TRAPPC13-205ENST00000504243 EVA1CP58658 441 aa6.84□□□□□ -1.31
TRAPPC13-205ENST00000504243 ADGRF1Q5T601 910 aa6.84□□□□□ -1.31
TRAPPC13-205ENST00000504243 ABHD17CQ6PCB6 329 aa6.84□□□□□ -1.31
TRAPPC13-205ENST00000504243 OR2W6PQ8NHA6 318 aa6.84□□□□□ -1.31
TRAPPC13-205ENST00000504243 SLC38A3Q99624 504 aa6.84□□□□□ -1.31
TRAPPC13-205ENST00000504243 H7BY64 318 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 ABLIM1O14639 778 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 GAS7O60861 476 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 DGKIO75912 1065 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 GLRX3O76003 335 aaKnown RBP6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 EFEMP2O95967 443 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 MPOP05164 745 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 POU3F2P20265 443 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 GALK1P51570 392 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 ERVFRD-1P60508 538 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 MVKQ03426 396 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 TMEM62Q0P6H9 643 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 FAM50AQ14320 339 aaKnown RBP6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 OLFML2BQ68BL8 750 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 STRA8Q7Z7C7 330 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 CABP7Q86V35 215 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 DDX42Q86XP3 938 aaKnown RBP eCLIP6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 C2orf69Q8N8R5 385 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 PANK1Q8TE04 598 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 FAM126AQ9BYI3 521 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 MTFR1LQ9H019 292 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 ZNF552Q9H707 407 aaPredicted RBP6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 PDLIM7Q9NR12 457 aa6.83□□□□□ -1.32
TRAPPC13-205ENST00000504243 HRKO00198 91 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 PPP1R11O60927 126 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 KRT37O76014 449 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 NPTXRO95502 500 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 COL6A2P12110 1019 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 KCNA6P17658 529 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 CDK11BP21127 795 aaKnown RBP6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 IL2P60568 153 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 SPIRE1Q08AE8 756 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 KIR3DS1Q14943 382 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 SEPT7Q16181 437 aaKnown RBP6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 SKOR2Q2VWA4 1001 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 TMEM177Q53S58 311 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 BICRALQ6AI39 1079 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 C16orf59Q7L2K0 433 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 NLRP10Q86W26 655 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 NXPE1Q8N323 547 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 PRPF38AQ8NAV1 312 aaKnown RBP6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 BHLHE22Q8NFJ8 381 aaPredicted RBP6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 PPP1R16BQ96T49 567 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 HOMER2Q9NSB8 354 aa6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.82□□□□□ -1.32
TRAPPC13-205ENST00000504243 FAM83GA6ND36 823 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 PEX10O60683 326 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 CKMP06732 381 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 CDKN1CP49918 316 aaPredicted RBP6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 MESP2Q0VG99 397 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 ZNF605Q86T29 641 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 OSTM1Q86WC4 334 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 TTC1Q99614 292 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 CELF4Q9BZC1 486 aaKnown RBP6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 EPB41L1Q9H4G0 881 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 TNFRSF12AQ9NP84 129 aa6.81□□□□□ -1.32
TRAPPC13-205ENST00000504243 ZNF891A8MT65 544 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 RAB11FIP3O75154 756 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 NTRK1P04629 796 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 MSL3P1P0C860 447 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 PDE6AP16499 860 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 NR1I3Q14994 352 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 DHCR24Q15392 516 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 PKN1Q16512 942 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 MROH9Q5TGP6 573 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 FERMT3Q86UX7 667 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 AFAP1L2Q8N4X5 818 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 GPR101Q96P66 508 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 CEP89Q96ST8 783 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
TRAPPC13-205ENST00000504243 DDX56Q9NY93 547 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms