RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 NSUN7Q8NE18 718 aaKnown RBP20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 GPRASP2Q96D09 838 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 PGBD1Q96JS3 809 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 ZSCAN31Q96LW9 406 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 AIFM3Q96NN9 605 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 POLR3EQ9NVU0 708 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 ORC3Q9UBD5 711 aaPredicted RBP20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 UBIAD1Q9Y5Z9 338 aa20.85■□□□□ 0.93
PDLIM7-209ENST00000503346 KPNA6O60684 536 aa20.84■□□□□ 0.93
PDLIM7-209ENST00000503346 ITGB5P18084 799 aa20.84■□□□□ 0.93
PDLIM7-209ENST00000503346 CELF3Q5SZQ8 465 aaKnown RBP20.84■□□□□ 0.93
PDLIM7-209ENST00000503346 AFG1LQ8WV93 481 aa20.84■□□□□ 0.93
PDLIM7-209ENST00000503346 H0YGN5 161 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 ST18O60284 1047 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 GGPS1O95749 300 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 FDPSP14324 419 aaKnown RBP20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 PURAQ00577 322 aaKnown RBP20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 TRIM60Q495X7 471 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 MYSM1Q5VVJ2 828 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 GALNT17Q6IS24 598 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 DHX37Q8IY37 1157 aaKnown RBP20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 PPTC7Q8NI37 304 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 CRYGNQ8WXF5 182 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 WASF1Q92558 559 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 CDHR1Q96JP9 859 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 SENP7Q9BQF6 1050 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 JADE2Q9NQC1 790 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 SH2B1Q9NRF2 756 aaPredicted RBP20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 PCDHA4Q9UN74 947 aa20.83■□□□□ 0.93
PDLIM7-209ENST00000503346 PDE4DIPQ5VU43 2346 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 A0A0U1RQG5 324 aaPredicted RBP20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 MMP3P08254 477 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 CDK7P50613 346 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 ARHGAP4P98171 946 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 NEDD9Q14511 834 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 NPY5RQ15761 445 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 SLC43A3Q8NBI5 491 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 DAGLBQ8NCG7 672 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 ATP11BQ9Y2G3 1177 aa20.82■□□□□ 0.92
PDLIM7-209ENST00000503346 KIAA1217Q5T5P2 1943 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 M0R2N6 131 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 ARVCFO00192 962 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 MAFGO15525 162 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 DTNBO60941 627 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 MYL3P08590 195 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 CYP3A4P08684 503 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 HOXD8P13378 290 aaPredicted RBP20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 XBP1P17861 261 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 MTMR1Q13613 665 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 METTL7BQ6UX53 244 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 ANKRD33Q7Z3H0 272 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 RASGRP4Q8TDF6 673 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 VTI1AQ96AJ9 217 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 TOX2Q96NM4 488 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 MXRA8Q9BRK3 442 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 MTG1Q9BT17 334 aaPredicted RBP20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 PHF20Q9BVI0 1012 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 SEZ6LQ9BYH1 1024 aa20.81■□□□□ 0.92
PDLIM7-209ENST00000503346 GRIN2DO15399 1336 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 JAK2O60674 1132 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 TLE2Q04725 743 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 CEP55Q53EZ4 464 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 CCDC83Q8IWF9 413 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 BLIDQ8IZY5 108 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 SPATA33Q96N06 139 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 LLPHQ9BRT6 129 aaKnown RBP20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 ALG1Q9BT22 464 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 MLXIPQ9HAP2 919 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 ALPK3Q96L96 1907 aa20.8■□□□□ 0.92
PDLIM7-209ENST00000503346 MROH7Q68CQ1 1323 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 MEIS1O00470 390 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 KCNA2P16389 499 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 ITGA7Q13683 1181 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 DGKDQ16760 1214 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 HSDL1Q3SXM5 330 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 NIPA1Q7RTP0 329 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 GIMAP8Q8ND71 665 aaPredicted RBP20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 CYP2W1Q8TAV3 490 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 BCAS3Q9H6U6 928 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 KCNJ14Q9UNX9 436 aa20.79■□□□□ 0.92
PDLIM7-209ENST00000503346 DNAH12Q6ZR08 3092 aa20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 SORBS3O60504 671 aa20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 PQBP1O60828 265 aaKnown RBP20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 ATP9AO75110 1047 aa20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 PPFIA4O75335 1185 aa20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 PSMC6P62333 389 aa20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 CYFIP1Q7L576 1253 aa20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 KCNH7Q9NS40 1196 aa20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 GJB4Q9NTQ9 266 aa20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 ZMYND8Q9ULU4 1186 aaPredicted RBP20.78■□□□□ 0.92
PDLIM7-209ENST00000503346 FAM86B1E9PN63 330 aa20.77■□□□□ 0.92
PDLIM7-209ENST00000503346 FAM86B2P0C5J1 330 aa20.77■□□□□ 0.92
PDLIM7-209ENST00000503346 CIITAP33076 1130 aa20.77■□□□□ 0.92
PDLIM7-209ENST00000503346 ZNF76P36508 570 aa20.77■□□□□ 0.92
PDLIM7-209ENST00000503346 MCM2P49736 904 aa20.77■□□□□ 0.92
PDLIM7-209ENST00000503346 FAM126BQ8IXS8 530 aa20.77■□□□□ 0.92
PDLIM7-209ENST00000503346 PDLIM7Q9NR12 457 aa20.77■□□□□ 0.92
PDLIM7-209ENST00000503346 IGLV3-22A0A075B6J6 115 aa20.76■□□□□ 0.91
PDLIM7-209ENST00000503346 DCDC2CA8MYV0 355 aa20.76■□□□□ 0.91
PDLIM7-209ENST00000503346 CD2BP2O95400 341 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms