RNA–Protein interactions for RNA: ENST00000498967.3

AC055713.1-201, humanhuman

TSL 2 BASIC

Gene AC055713.1, Length 8,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055713.1-201ENST00000498967 A0A0B4J269 797 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ANP32DO95626 131 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 FAM107AO95990 144 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 KRT6AP02538 564 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 KRT6BP04259 564 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ATP2B4P23634 1241 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 KRT6CP48668 564 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 SNAP25P60880 206 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 TUBB3Q13509 450 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 CTTNQ14247 550 aaKnown RBP12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 RAB42Q8N4Z0 105 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 GCNAQ96QF7 691 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ZNF556Q9HAH1 456 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 IL10P22301 178 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 TMEM87BQ96K49 555 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ITGB1BP2Q9UKP3 347 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 APOBEC2Q9Y235 224 aaKnown RBP12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ARL2BPQ9Y2Y0 163 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 RBM8AQ9Y5S9 174 aaKnown RBP12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 POC1B-GALNT4F8VUJ3 575 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ARIH2O95376 493 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 CCT5P48643 541 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 KRT72Q14CN4 511 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 CCDC142Q17RM4 750 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 FAM180AQ6UWF9 173 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 NEK8Q86SG6 692 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 MT-ND3P03897 115 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ADALQ6DHV7 355 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 DEPDC7Q96QD5 511 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 RUBCNLQ9H714 662 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 C14orf93Q9H972 538 aaKnown RBP12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 NFU1Q9UMS0 254 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 DIDO1Q9BTC0 2240 aaKnown RBP12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 TARSL2A2RTX5 802 aaKnown RBP12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 IMPG1Q17R60 797 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 CENPPQ6IPU0 288 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ZNF555Q8NEP9 628 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 ANO3Q9BYT9 981 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 GID8Q9NWU2 228 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 RALBP11234 206 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 EPHB4P54760 987 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 SLFNL1Q499Z3 407 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 TTC23LQ6PF05 361 aa12.05□□□□□ -0.48
AC055713.1-201ENST00000498967 CA4P22748 312 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 SERPINB4P48594 390 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 GOLGA8FQ08AF8 430 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 GOLGA8DPQ0D2H9 430 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 LRMPQ12912 555 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 DMP1Q13316 513 aaPredicted RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 SLC9C2Q5TAH2 1124 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 SNX30Q5VWJ9 437 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 FAM45BPQ6NSW5 357 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 KRT25Q7Z3Z0 450 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 MRPL48Q96GC5 212 aaKnown RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 THUMPD2Q9BTF0 503 aaKnown RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 RRP15Q9Y3B9 282 aaKnown RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 RRAGAQ7L523 313 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 MICALL2Q8IY33 904 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 RYBPQ8N488 228 aaPredicted RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 LDHBP07195 334 aaKnown RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 IRX1P78414 480 aaPredicted RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 NME9Q86XW9 330 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 ZNF274Q96GC6 653 aaPredicted RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 CHMP2BQ9UQN3 213 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 MAP1BP46821 2468 aaKnown RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 SMARCA5O60264 1052 aaPredicted RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 KRT37O76014 449 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 PTK2Q05397 1052 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 HDAC1Q13547 482 aaPredicted RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 MAPRE2Q15555 327 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 DEPTORQ8TB45 409 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 GRIN2AQ12879 1464 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 TBC1D12O60347 775 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 VCAM1P19320 739 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 NLRX1Q86UT6 975 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 TBC1D19Q8N5T2 526 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 LCMT1Q9UIC8 334 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 FAM32AQ9Y421 112 aaKnown RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 CLEC4MQ9H2X3 399 aaPredicted RBP12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 RAD21L1Q9H4I0 556 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 C11orf88Q6PI97 169 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 IKBIPQ70UQ0 350 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 PSMB7Q99436 277 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 TRIM54Q9BYV2 358 aa12.04□□□□□ -0.48
AC055713.1-201ENST00000498967 IQCA1LA6NCM1 817 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 C11orf95C9JLR9 678 aaPredicted RBP12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 SOX5P35711 763 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 NBPF14Q5TI25 921 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 TTBK2Q6IQ55 1244 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 ANKS3Q6ZW76 656 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 EFHBQ8N7U6 833 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 COPG2Q9UBF2 871 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 SMARCA1P28370 1054 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 HSPA2P54652 639 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 POSTNQ15063 836 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 CCDC149Q6ZUS6 474 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 IFNL2Q8IZJ0 200 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 MAML1Q92585 1016 aa12.03□□□□□ -0.48
AC055713.1-201ENST00000498967 CALR3Q96L12 384 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms