RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 IFIT2P09913 472 aaKnown RBP6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 ITPKAP23677 461 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 FOXO4P98177 505 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 HLFQ16534 295 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 CCDC57Q2TAC2 916 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 EPHA10Q5JZY3 1008 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 PRPF40BQ6NWY9 871 aaKnown RBP6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 CLEC4GQ6UXB4 293 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 NLRP10Q86W26 655 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 ZNF34Q8IZ26 560 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 ZNF296Q8WUU4 475 aaPredicted RBP6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 JARID2Q92833 1246 aaPredicted RBP6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 CSRNP1Q96S65 589 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 PLA2G12BQ9BX93 195 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 IL1RAPL2Q9NP60 686 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 TRMT112Q9UI30 125 aaKnown RBP6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 TTC41PQ6P2S7 1318 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 BRCA2P51587 3418 aa6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 MYH14Q7Z406 1995 aaKnown RBP6.42□□□□□ -1.38
HMGXB4-208ENST00000498325 ZNF862O60290 1169 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 PDE8AO60658 829 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 CAMTA2O94983 1202 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 EN2P19622 333 aaPredicted RBP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 GPTP24298 496 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 RFX5P48382 616 aaPredicted RBP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 HUNKP57058 714 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 FKBP4Q02790 459 aaKnown RBP eCLIP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 PTPN12Q05209 780 aaKnown RBP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 KIAA0319Q5VV43 1072 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 FBXO46Q6PJ61 603 aaPredicted RBP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 USP50Q70EL3 339 aaPredicted RBP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 FAM89AQ96GI7 184 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 KIRREL1Q96J84 757 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 SSU72Q9NP77 194 aaKnown RBP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 PA2G4Q9UQ80 394 aaKnown RBP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 SALL3Q9BXA9 1300 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 COL11A2P13942 1736 aaPredicted RBP6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 ANKRD36CQ5JPF3 1778 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 NUP98P52948 1817 aa6.41□□□□□ -1.38
HMGXB4-208ENST00000498325 SPTBN5Q9NRC6 3674 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 COL4A5P29400 1685 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 ANKRD18BA2A2Z9 1011 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 EYA2O00167 538 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 IRS4O14654 1257 aaPredicted RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 GLRX3O76003 335 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 SASH1O94885 1247 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 KRT1P04264 644 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 CSF1RP07333 972 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 SDSP20132 328 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 PDE6BP35913 854 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 IL15P40933 162 aaPredicted RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 IFIT5Q13325 482 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 KIF4BQ2VIQ3 1234 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 TAF7LQ5H9L4 462 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 TMEM67Q5HYA8 995 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 RGMBQ6NW40 437 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 OTUD7AQ8TE49 926 aaPredicted RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 HEXIM2Q96MH2 286 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 IPO9Q96P70 1041 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 UTP14AQ9BVJ6 771 aaKnown RBP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 BRIP1Q9BX63 1249 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 KRTAP17-1Q9BYP8 105 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 SIL1Q9H173 461 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 EHD4Q9H223 541 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 GPR108Q9NPR9 543 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 ECHDC1Q9NTX5 307 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 NARFQ9UHQ1 456 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 HDAC9Q9UKV0 1011 aa6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 NIP7Q9Y221 180 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGXB4-208ENST00000498325 SH3TC1Q8TE82 1336 aa6.4□□□□□ -1.39
HMGXB4-208ENST00000498325 UNC80Q8N2C7 3258 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 SLX4Q8IY92 1834 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 TRPM7Q96QT4 1865 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 CIAO1O76071 339 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 TBC1D8O95759 1140 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 INHBBP09529 407 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 SRGNP10124 158 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 GSPT1P15170 499 aaKnown RBP6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 IARSP41252 1262 aaKnown RBP6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 MFAP1P55081 439 aaKnown RBP6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 CCDC93Q567U6 631 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 SOGA3Q5TF21 947 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 SUSD4Q5VX71 490 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 STYK1Q6J9G0 422 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 PRR5LQ6MZQ0 368 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 CYFIP1Q7L576 1253 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 AACSQ86V21 672 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 FBXO15Q8NCQ5 510 aaPredicted RBP6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 KLHDC4Q8TBB5 520 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 RILPL2Q969X0 211 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 PBXIP1Q96AQ6 731 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 C22orf23Q9BZE7 217 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 NYXQ9GZU5 481 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 GTF2IRD1Q9UHL9 959 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 AKAP2Q9Y2D5 859 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 PCDHGC5Q9Y5F6 944 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 RANBP2P49792 3224 aaKnown RBP6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 ANKRD31Q8N7Z5 1873 aa6.39□□□□□ -1.39
HMGXB4-208ENST00000498325 VCANP13611 3396 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms