RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 TMPRSS2O15393 492 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 PRODHO43272 600 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 CLEC3AO75596 197 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 ECEL1O95672 775 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 CPP00450 1065 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 HRGP04196 525 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 RBP3P10745 1247 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 COL6A1P12109 1028 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 BMP1P13497 986 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 VCAM1P19320 739 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 MAOBP27338 520 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 POLR2BP30876 1174 aaKnown RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 LSSP48449 732 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 ARL4DP49703 201 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 GJA9P57773 515 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 GRM1Q13255 1194 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 OS9Q13438 667 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 FAM50AQ14320 339 aaKnown RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 SLBPQ14493 270 aaKnown RBP eCLIP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 SUZ12Q15022 739 aaKnown RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 SV2CQ496J9 727 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 HEATR6Q6AI08 1181 aaKnown RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 TOGARAM2Q6ZUX3 1019 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 HFE2Q6ZVN8 426 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 Q7L0L9 218 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 CHST15Q7LFX5 561 aaPredicted RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZBTB46Q86UZ6 589 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 FCHSD1Q86WN1 690 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 C7orf61Q8IZ16 206 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 SPICE1Q8N0Z3 855 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 NME8Q8N427 588 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 KREMEN2Q8NCW0 462 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 PJA1Q8NG27 643 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 OR2W6PQ8NHA6 318 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 DNAJB8Q8NHS0 232 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZNF507Q8TCN5 953 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 DCAF11Q8TEB1 546 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 ATXN2LQ8WWM7 1075 aaKnown RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 KCTD13Q8WZ19 329 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 ELMO3Q96BJ8 720 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 DCAF5Q96JK2 942 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 STRBPQ96SI9 672 aaKnown RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 TMPRSS13Q9BYE2 586 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 GBP3Q9H0R5 595 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 CYP26B1Q9NR63 512 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 DIS3Q9Y2L1 958 aaKnown RBP3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 STARD13Q9Y3M8 1113 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 CASKIN1Q8WXD9 1431 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 C5orf42Q9H799 3197 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 PTPN13Q12923 2485 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 COL18A1P39060 1754 aa3.15□□□□□ -1.91
CKS1BP2-201ENST00000497342 AQP7O14520 342 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 PRPF3O43395 683 aaKnown RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 TBX1O43435 398 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 MAN1A2O60476 641 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ULK1O75385 1050 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 PPM1BO75688 479 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 SLFN14P0C7P3 912 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CPB1P15086 417 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 DPEP1P16444 411 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZSCAN20P17040 1043 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 TYRP1P17643 537 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 KCNA3P22001 575 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 LPOP22079 712 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 RNF4P78317 190 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ID3Q02535 119 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 GSTM4Q03013 218 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 STRN3Q13033 797 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ZNF460Q14592 562 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 SETDB1Q15047 1291 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 MINDY4Q4G0A6 757 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 HSP90AB4PQ58FF6 505 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 SYCP2LQ5T4T6 812 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 GPR158Q5T848 1215 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CREB3L3Q68CJ9 461 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CDCA2Q69YH5 1023 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CIAPIN1Q6FI81 312 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CNNM4Q6P4Q7 775 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 SLCO4C1Q6ZQN7 724 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 RIPOR1Q6ZS17 1223 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 SMIM5Q71RC9 77 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 OTOP1Q7RTM1 612 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 PCGF5Q86SE9 256 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 WDR75Q8IWA0 830 aaKnown RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CPA6Q8N4T0 437 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 DTWD1Q8N5C7 304 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 LRRN4CLQ8ND94 238 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 FAM13CQ8NE31 585 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 DCAF4Q8WV16 495 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 LEO1Q8WVC0 666 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 JPH3Q8WXH2 748 aaPredicted RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 COPS5Q92905 334 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 KIFC2Q96AC6 838 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 RUNDC1Q96C34 613 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 YIPF4Q9BSR8 244 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ASPNQ9BXN1 380 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 CELF4Q9BZC1 486 aaKnown RBP3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 GP6Q9HCN6 339 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 ATP13A2Q9NQ11 1180 aa3.14□□□□□ -1.91
CKS1BP2-201ENST00000497342 DISC1Q9NRI5 854 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms