RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 EXOC2Q96KP1 924 aa5.75□□□□□ -1.49
SMC4-225ENST00000497203 MRPL4Q9BYD3 311 aaKnown RBP5.75□□□□□ -1.49
SMC4-225ENST00000497203 MYO1BO43795 1136 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 MSCO60682 206 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 TKFCQ3LXA3 575 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 KCNT2Q6UVM3 1135 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 FILIP1Q7Z7B0 1213 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 SIAH1Q8IUQ4 282 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 Q8N1Y9 231 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 PHF20Q9BVI0 1012 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 BRINP2Q9C0B6 783 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 NCOA5Q9HCD5 579 aaKnown RBP5.74□□□□□ -1.49
SMC4-225ENST00000497203 JAG2Q9Y219 1238 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 IRS2Q9Y4H2 1338 aa5.74□□□□□ -1.49
SMC4-225ENST00000497203 B8ZZF3 427 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 IRS4O14654 1257 aaPredicted RBP5.73□□□□□ -1.49
SMC4-225ENST00000497203 APPP05067 770 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 PI3P19957 117 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 GTF2A2P52657 109 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 LSAMPQ13449 338 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 PTPROQ16827 1216 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 LRRC56Q8IYG6 542 aaPredicted RBP5.73□□□□□ -1.49
SMC4-225ENST00000497203 ZSCAN18Q8TBC5 510 aaPredicted RBP5.73□□□□□ -1.49
SMC4-225ENST00000497203 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 NINJ1Q92982 152 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 TSPAN17Q96FV3 270 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 TRMT2BQ96GJ1 504 aaKnown RBP5.73□□□□□ -1.49
SMC4-225ENST00000497203 PEX11GQ96HA9 241 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 TMEM169Q96HH4 297 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 CHAMP1Q96JM3 812 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 SIGLEC10Q96LC7 697 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 EPB41L4AQ9HCS5 686 aaPredicted RBP5.73□□□□□ -1.49
SMC4-225ENST00000497203 GPR27Q9NS67 375 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 PPARGC1AQ9UBK2 798 aaKnown RBP5.73□□□□□ -1.49
SMC4-225ENST00000497203 NUDT5Q9UKK9 219 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 CNOT6Q9ULM6 557 aaKnown RBP5.73□□□□□ -1.49
SMC4-225ENST00000497203 KCTD3Q9Y597 815 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 CD2APQ9Y5K6 639 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 IRAK3Q9Y616 596 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 X6R8D5 127 aa5.73□□□□□ -1.49
SMC4-225ENST00000497203 PPM1GO15355 546 aaPredicted RBP5.72□□□□□ -1.49
SMC4-225ENST00000497203 SGSM2O43147 1006 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 BUB1BO60566 1050 aaPredicted RBP5.72□□□□□ -1.49
SMC4-225ENST00000497203 EFCAB14O75071 495 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 IGFBP6P24592 240 aaPredicted RBP5.72□□□□□ -1.49
SMC4-225ENST00000497203 GABREP78334 506 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 RBM10P98175 930 aaKnown RBP5.72□□□□□ -1.49
SMC4-225ENST00000497203 PABPC4Q13310 644 aaKnown RBP eCLIP5.72□□□□□ -1.49
SMC4-225ENST00000497203 DALRD3Q5D0E6 543 aaKnown RBP5.72□□□□□ -1.49
SMC4-225ENST00000497203 TTLL10Q6ZVT0 673 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 DCP2Q8IU60 420 aaKnown RBP5.72□□□□□ -1.49
SMC4-225ENST00000497203 RIOX2Q8IUF8 465 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 NIM1KQ8IY84 436 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 TMEFF1Q8IYR6 380 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 DCAF4Q8WV16 495 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 ALG3Q92685 438 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 MFSD3Q96ES6 412 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 CDIP1Q9H305 208 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 IFT57Q9NWB7 429 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 CLDND1Q9NY35 253 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 ASXL2Q76L83 1435 aa5.72□□□□□ -1.49
SMC4-225ENST00000497203 H7BY64 318 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 ASGR2P07307 311 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 ATF2P15336 505 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 PMLP29590 882 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 MC3RP41968 323 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 LIMS1P48059 325 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 SLC9A5Q14940 896 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 TRIM61Q5EBN2 209 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 MROH9Q5TGP6 573 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 RSPO2Q6UXX9 243 aaPredicted RBP5.71□□□□□ -1.5
SMC4-225ENST00000497203 MAMDC2Q7Z304 686 aaPredicted RBP5.71□□□□□ -1.5
SMC4-225ENST00000497203 IRF2BPLQ9H1B7 796 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 SFMBT1Q9UHJ3 866 aa5.71□□□□□ -1.5
SMC4-225ENST00000497203 hCG_2014768A0A024R1R8 64 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 KCNQ2O43526 872 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 NUAK1O60285 661 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 ZBTB7AO95365 584 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 RAPGEF3O95398 923 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 NAT1P18440 290 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 SLC6A11P48066 632 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 MASP1P48740 699 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 IGBP1P78318 339 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 TM4SF20Q53R12 229 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 CIAPIN1Q6FI81 312 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 STYK1Q6J9G0 422 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 LBX2Q6XYB7 198 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 FAM129CQ86XR2 697 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 SEC14L1Q92503 715 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 PTPRN2Q92932 1015 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 AP5M1Q9H0R1 490 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 INTS7Q9NVH2 962 aaKnown RBP5.7□□□□□ -1.5
SMC4-225ENST00000497203 MAGEC2Q9UBF1 373 aaPredicted RBP5.7□□□□□ -1.5
SMC4-225ENST00000497203 PALD1Q9ULE6 856 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 COA3Q9Y2R0 106 aaPredicted RBP5.7□□□□□ -1.5
SMC4-225ENST00000497203 TRAF6Q9Y4K3 522 aa5.7□□□□□ -1.5
SMC4-225ENST00000497203 C6orf222P0C671 652 aaPredicted RBP5.69□□□□□ -1.5
SMC4-225ENST00000497203 ZSCAN22P10073 491 aaPredicted RBP5.69□□□□□ -1.5
SMC4-225ENST00000497203 NCAM1P13591 858 aa5.69□□□□□ -1.5
SMC4-225ENST00000497203 PFKLP17858 780 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms