RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 PAK2Q13177 524 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 PLCL1Q15111 1095 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 TAF7Q15545 349 aaPredicted RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 TTLL5Q6EMB2 1281 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 CCDC80Q76M96 950 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 DAAM2Q86T65 1068 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 DTX1Q86Y01 620 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 HID1Q8IV36 788 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 BRSK2Q8IWQ3 736 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 FLCNQ8NFG4 579 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 MYRIPQ8NFW9 859 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 HDAC7Q8WUI4 952 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 N4BP2L2Q92802 583 aaPredicted RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 PLEKHG4BQ96PX9 1271 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 DIAPH3Q9NSV4 1193 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 ZNHIT6Q9NWK9 470 aaKnown RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 TBC1D7Q9P0N9 293 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 ZSWIM5Q9P217 1185 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 XPO7Q9UIA9 1087 aaKnown RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 ATP6V0A2Q9Y487 856 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 BRD4O60885 1362 aaPredicted RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 A0A1W2PRQ8 180 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 KIAA1324LA8MWY0 1029 aaPredicted RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 C9IYK1 514 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 GREM1O60565 184 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 LRIG2O94898 1065 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 EFEMP2O95967 443 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 WNT11O96014 354 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 VIL1P09327 827 aaKnown RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 SDHBP21912 280 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 RDXP35241 583 aaKnown RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 COX10Q12887 443 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 EIF4A2Q14240 407 aaKnown RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 KIR3DS1Q14943 382 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 WTAPQ15007 396 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 RBBP5Q15291 538 aaKnown RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC5A9Q2M3M2 681 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 TTC19Q6DKK2 380 aaPredicted RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 HDGFL2Q7Z4V5 671 aaPredicted RBP3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 TMC3Q7Z5M5 1100 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 KIAA0825Q8IV33 1275 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 RNF34Q969K3 372 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 FRMD6Q96NE9 622 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 C19orf44Q9H6X5 657 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 ZFYVE1Q9HBF4 777 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 QPCTLQ9NXS2 382 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 SPATA7Q9P0W8 599 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 PCSK1NQ9UHG2 260 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 CFAP45Q9UL16 551 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 EFR3BQ9Y2G0 817 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 INPP5FQ9Y2H2 1132 aa3.55□□□□□ -1.84
SNRNP48-202ENST00000496946 DISP3Q9P2K9 1392 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 GTPBP10A4D1E9 387 aaKnown RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 H0Y3Z8 333 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 KIF3BO15066 747 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 TP53P04637 393 aaPredicted RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 HNRNPCP07910 306 aaKnown RBP eCLIP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 HOXC13P31276 330 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 RPS6KA3P51812 740 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 ERVFC1P60507 584 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 PDIA5Q14554 519 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 TBC1D25Q3MII6 688 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 RALGPS1Q5JS13 557 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 HP1BP3Q5SSJ5 553 aaPredicted RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 DCAF15Q66K64 600 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 CPLX2Q6PUV4 134 aaKnown RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC4A10Q6U841 1118 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SASS6Q6UVJ0 657 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 ARHGAP27Q6ZUM4 889 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SAPCD2Q86UD0 394 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 TEX19Q8NA77 164 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 APPL2Q8NEU8 664 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SH3TC2Q8TF17 1288 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 UBE2FQ969M7 185 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 THOC1Q96FV9 657 aaKnown RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 ZNF496Q96IT1 587 aaPredicted RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 FOXQ1Q9C009 403 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC7A5P2Q9GIP4 190 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SLKQ9H2G2 1235 aaPredicted RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 ARNT2Q9HBZ2 717 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 PTPRHQ9HD43 1115 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 HOMER2Q9NSB8 354 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 EBF1Q9UH73 591 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 TBK1Q9UHD2 729 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 RRP15Q9Y3B9 282 aaKnown RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 PHLDB1Q86UU1 1377 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 PIK3R4Q99570 1358 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 DNAJC25-GNG10A0A024R161 153 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SLC22A31A6NKX4 558 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 MYL1P05976 194 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 PSMA3P25788 255 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 MRE11P49959 708 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 ICA1Q05084 483 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 DEUP1Q05D60 604 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 LRRC41Q15345 812 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 VPS72Q15906 364 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 MUM1Q2TAK8 710 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 CWF19L2Q2TBE0 894 aaKnown RBP3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 ZNF792Q3KQV3 632 aa3.54□□□□□ -1.84
SNRNP48-202ENST00000496946 SFMBT2Q5VUG0 894 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms