RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 MUTYHQ9UIF7 546 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 RBM19Q9Y4C8 960 aaKnown RBP13.11□□□□□ -0.31
LRP8-211ENST00000496580 MYO15AQ9UKN7 3530 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
LRP8-211ENST00000496580 H3BNC9 293 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 CDC45O75419 566 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 PDHBP11177 359 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
LRP8-211ENST00000496580 GPM6BQ13491 265 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 MFSD10Q14728 455 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 COL19A1Q14993 1142 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 PTPROQ16827 1216 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 KIAA0753Q2KHM9 967 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 ZMYM1Q5SVZ6 1142 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 VPS53Q5VIR6 699 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 RPAINQ86UA6 219 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 ADHFE1Q8IWW8 467 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 C7orf31Q8N865 590 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 TAAR1Q96RJ0 339 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 CPVLQ9H3G5 476 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 COL20A1Q9P218 1284 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 WDR19Q8NEZ3 1342 aa13.1□□□□□ -0.31
LRP8-211ENST00000496580 HAS3O00219 553 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 SORBS3O60504 671 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 F2P00734 622 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 AMHP03971 560 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 LTBRP36941 435 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 DLX2Q07687 328 aaPredicted RBP13.09□□□□□ -0.31
LRP8-211ENST00000496580 RALGAPA2Q2PPJ7 1873 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 RRP12Q5JTH9 1297 aaKnown RBP13.09□□□□□ -0.31
LRP8-211ENST00000496580 FSD1Q9BTV5 496 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 NSUN3Q9H649 340 aaKnown RBP13.09□□□□□ -0.31
LRP8-211ENST00000496580 PRKAG3Q9UGI9 489 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 CTNNA3Q9UI47 895 aa13.09□□□□□ -0.31
LRP8-211ENST00000496580 COL4A6Q14031 1691 aa13.08□□□□□ -0.31
LRP8-211ENST00000496580 TECTAO75443 2155 aa13.08□□□□□ -0.31
LRP8-211ENST00000496580 MYH7BA7E2Y1 1941 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 ORC4O43929 436 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 UPP2O95045 317 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 TOP1P11387 765 aaKnown RBP13.08□□□□□ -0.32
LRP8-211ENST00000496580 ZNF543Q08ER8 600 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 DGKDQ16760 1214 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 IER5LQ5T953 404 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 FBXO11Q86XK2 927 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 TMEM192Q8IY95 271 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 PI4K2BQ8TCG2 481 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.32
LRP8-211ENST00000496580 OTUD7AQ8TE49 926 aaPredicted RBP13.08□□□□□ -0.32
LRP8-211ENST00000496580 TOMM22Q9NS69 142 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 ANAPC4Q9UJX5 808 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 DMDP11532 3685 aa13.08□□□□□ -0.32
LRP8-211ENST00000496580 MYO7AQ13402 2215 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 B4DLN1 442 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 MBTPS2O43462 519 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 CSPG5O95196 566 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 GOLGA8HP0CJ92 632 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.32
LRP8-211ENST00000496580 THPOP40225 353 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 MRPL12P52815 198 aaKnown RBP13.07□□□□□ -0.32
LRP8-211ENST00000496580 PLEKHG4Q58EX7 1191 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 MFSD14AQ96MC6 490 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 SAMD11Q96NU1 681 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 KATNAL1Q9BW62 490 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 DDX41Q9UJV9 622 aaKnown RBP13.07□□□□□ -0.32
LRP8-211ENST00000496580 FAM50BQ9Y247 325 aa13.07□□□□□ -0.32
LRP8-211ENST00000496580 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.06□□□□□ -0.32
LRP8-211ENST00000496580 RSPH10B2B2RC85 870 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 TRIM6-TRIM34B2RNG4 842 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 TBX10O75333 385 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 FGRP09769 529 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 RSPH10BP0C881 870 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 SNHG28P0DPA3 235 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 GSPT1P15170 499 aaKnown RBP13.06□□□□□ -0.32
LRP8-211ENST00000496580 EIF2AK2P19525 551 aaKnown RBP13.06□□□□□ -0.32
LRP8-211ENST00000496580 SDSP20132 328 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 ANP32AP39687 249 aaKnown RBP13.06□□□□□ -0.32
LRP8-211ENST00000496580 HYAL1Q12794 435 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 SMAD2Q15796 467 aaKnown RBP13.06□□□□□ -0.32
LRP8-211ENST00000496580 HERC4Q5GLZ8 1057 aaPredicted RBP13.06□□□□□ -0.32
LRP8-211ENST00000496580 RNF135Q8IUD6 432 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 DHX37Q8IY37 1157 aaKnown RBP13.06□□□□□ -0.32
LRP8-211ENST00000496580 PPTC7Q8NI37 304 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 TOP1MTQ969P6 601 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 EMID1Q96A84 441 aaPredicted RBP13.06□□□□□ -0.32
LRP8-211ENST00000496580 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 EMSYQ7Z589 1322 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 KMT2EQ8IZD2 1858 aa13.06□□□□□ -0.32
LRP8-211ENST00000496580 LINC01565O15544 149 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 CTSHP09668 335 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 LINC00271P0C7V0 271 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 CTNNB1P35222 781 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 STXBP2Q15833 593 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 CDC37Q16543 378 aaPredicted RBP13.05□□□□□ -0.32
LRP8-211ENST00000496580 CTC1Q2NKJ3 1217 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 SERINC5Q86VE9 423 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 TICAM2Q86XR7 235 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 RGS22Q8NE09 1264 aa13.05□□□□□ -0.32
LRP8-211ENST00000496580 NSUN6Q8TEA1 469 aaKnown RBP13.05□□□□□ -0.32
LRP8-211ENST00000496580 RMDN3Q96TC7 470 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms