RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 TRIOBPQ9H2D6 2365 aa24.36■■□□□ 1.49
PPM1F-208ENST00000496143 GRIN2DO15399 1336 aa24.35■■□□□ 1.49
PPM1F-208ENST00000496143 SUPT20HL2P0C7V6 817 aa24.35■■□□□ 1.49
PPM1F-208ENST00000496143 CCT2P78371 535 aaKnown RBP24.35■■□□□ 1.49
PPM1F-208ENST00000496143 ANKRD1Q15327 319 aa24.35■■□□□ 1.49
PPM1F-208ENST00000496143 TRIM22Q8IYM9 498 aa24.35■■□□□ 1.49
PPM1F-208ENST00000496143 ZFP91Q96JP5 570 aaPredicted RBP24.35■■□□□ 1.49
PPM1F-208ENST00000496143 CDHR1Q96JP9 859 aa24.35■■□□□ 1.49
PPM1F-208ENST00000496143 SPATA33Q96N06 139 aa24.35■■□□□ 1.49
PPM1F-208ENST00000496143 SPATA31C2B4DYI2 1134 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 TIMP1P01033 207 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 CD4P01730 458 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 PTPN11Q06124 597 aaPredicted RBP24.34■■□□□ 1.49
PPM1F-208ENST00000496143 AP3B2Q13367 1082 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 MYSM1Q5VVJ2 828 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 MCTP2Q6DN12 878 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 TYW1BQ6NUM6 668 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 NFRKBQ6P4R8 1299 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 PHKBQ93100 1093 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 GPRASP2Q96D09 838 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 KATNAL1Q9BW62 490 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 SLC26A6Q9BXS9 759 aa24.34■■□□□ 1.49
PPM1F-208ENST00000496143 ALDH8A1Q9H2A2 487 aaPredicted RBP24.34■■□□□ 1.49
PPM1F-208ENST00000496143 NCOA5Q9HCD5 579 aaKnown RBP24.34■■□□□ 1.49
PPM1F-208ENST00000496143 LTBP2Q14767 1821 aa24.33■■□□□ 1.49
PPM1F-208ENST00000496143 ESYT2A0FGR8 921 aa24.33■■□□□ 1.49
PPM1F-208ENST00000496143 PPFIA4O75335 1185 aa24.33■■□□□ 1.49
PPM1F-208ENST00000496143 FXR1P51114 621 aaKnown RBP eCLIP24.33■■□□□ 1.49
PPM1F-208ENST00000496143 NTRK3Q16288 839 aa24.33■■□□□ 1.49
PPM1F-208ENST00000496143 NBPF20Q3BBV1 942 aa24.33■■□□□ 1.49
PPM1F-208ENST00000496143 FAM47CQ5HY64 1035 aa24.33■■□□□ 1.49
PPM1F-208ENST00000496143 GIMAP8Q8ND71 665 aaPredicted RBP24.33■■□□□ 1.49
PPM1F-208ENST00000496143 CCDC148Q8NFR7 591 aa24.33■■□□□ 1.49
PPM1F-208ENST00000496143 C6orf50Q9HD87 102 aa24.33■■□□□ 1.49
PPM1F-208ENST00000496143 NOP56O00567 594 aaKnown RBP24.32■■□□□ 1.48
PPM1F-208ENST00000496143 GNA11P29992 359 aa24.32■■□□□ 1.48
PPM1F-208ENST00000496143 SP2Q02086 613 aa24.32■■□□□ 1.48
PPM1F-208ENST00000496143 FPGSQ05932 587 aa24.32■■□□□ 1.48
PPM1F-208ENST00000496143 METTL7BQ6UX53 244 aa24.32■■□□□ 1.48
PPM1F-208ENST00000496143 IL17RAQ96F46 866 aa24.32■■□□□ 1.48
PPM1F-208ENST00000496143 SENP7Q9BQF6 1050 aa24.32■■□□□ 1.48
PPM1F-208ENST00000496143 PCDH10Q9P2E7 1040 aa24.32■■□□□ 1.48
PPM1F-208ENST00000496143 MAFGO15525 162 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 B4GALT4O60513 344 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 CHMP4BP1P59074 171 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 SSRP1Q08945 709 aaKnown RBP24.31■■□□□ 1.48
PPM1F-208ENST00000496143 PKN1Q16512 942 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 MFSD5Q6N075 450 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 TMEM199Q8N511 208 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 BICD2Q8TD16 824 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 ANO3Q9BYT9 981 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 ZMYND12Q9H0C1 365 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 TRPV6Q9H1D0 765 aa24.31■■□□□ 1.48
PPM1F-208ENST00000496143 SORBS3O60504 671 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 CDKL5O76039 1030 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 HOXD8P13378 290 aaPredicted RBP24.3■■□□□ 1.48
PPM1F-208ENST00000496143 ITGB8P26012 769 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 STK3Q13188 491 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 MTMR1Q13613 665 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 HSDL1Q3SXM5 330 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 LARP6Q9BRS8 491 aaKnown RBP24.3■■□□□ 1.48
PPM1F-208ENST00000496143 PPP1R12CQ9BZL4 782 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 SLKQ9H2G2 1235 aaPredicted RBP24.3■■□□□ 1.48
PPM1F-208ENST00000496143 HIPK3Q9H422 1215 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 UBIAD1Q9Y5Z9 338 aa24.3■■□□□ 1.48
PPM1F-208ENST00000496143 SCN10AQ9Y5Y9 1956 aa24.29■■□□□ 1.48
PPM1F-208ENST00000496143 F2P00734 622 aa24.29■■□□□ 1.48
PPM1F-208ENST00000496143 SEMA3FQ13275 785 aa24.29■■□□□ 1.48
PPM1F-208ENST00000496143 PPIGQ13427 754 aaKnown RBP eCLIP24.29■■□□□ 1.483e-7■■■■■ 29.2
PPM1F-208ENST00000496143 LRIT3Q3SXY7 679 aa24.29■■□□□ 1.48
PPM1F-208ENST00000496143 SH3GLB2Q9NR46 395 aa24.29■■□□□ 1.48
PPM1F-208ENST00000496143 NOD1Q9Y239 953 aa24.29■■□□□ 1.48
PPM1F-208ENST00000496143 DEXIO95424 95 aa24.28■■□□□ 1.48
PPM1F-208ENST00000496143 ITGB5P18084 799 aa24.28■■□□□ 1.48
PPM1F-208ENST00000496143 CLK2P49760 499 aaKnown RBP24.28■■□□□ 1.48
PPM1F-208ENST00000496143 CYFIP1Q7L576 1253 aa24.28■■□□□ 1.48
PPM1F-208ENST00000496143 SESTD1Q86VW0 696 aa24.28■■□□□ 1.48
PPM1F-208ENST00000496143 REXO1Q8N1G1 1221 aaKnown RBP24.28■■□□□ 1.48
PPM1F-208ENST00000496143 C7orf31Q8N865 590 aa24.28■■□□□ 1.48
PPM1F-208ENST00000496143 KAT2BQ92831 832 aa24.28■■□□□ 1.48
PPM1F-208ENST00000496143 JADE2Q9NQC1 790 aa24.28■■□□□ 1.48
PPM1F-208ENST00000496143 TRMT13Q9NUP7 481 aaKnown RBP24.28■■□□□ 1.48
PPM1F-208ENST00000496143 ZNF286BP0CG31 522 aa24.27■■□□□ 1.48
PPM1F-208ENST00000496143 SREBF1P36956 1147 aa24.27■■□□□ 1.48
PPM1F-208ENST00000496143 PSEN2P49810 448 aa24.27■■□□□ 1.48
PPM1F-208ENST00000496143 MFSD10Q14728 455 aa24.27■■□□□ 1.48
PPM1F-208ENST00000496143 FAM177A1Q8N128 213 aaPredicted RBP24.27■■□□□ 1.48
PPM1F-208ENST00000496143 TMEM260Q9NX78 707 aa24.27■■□□□ 1.48
PPM1F-208ENST00000496143 RANBP2P49792 3224 aaKnown RBP24.27■■□□□ 1.48
PPM1F-208ENST00000496143 PPFIA3O75145 1194 aa24.26■■□□□ 1.47
PPM1F-208ENST00000496143 SEC24BO95487 1268 aa24.26■■□□□ 1.47
PPM1F-208ENST00000496143 AK2P54819 239 aa24.26■■□□□ 1.47
PPM1F-208ENST00000496143 KIAA0753Q2KHM9 967 aa24.26■■□□□ 1.47
PPM1F-208ENST00000496143 JAKMIP3Q5VZ66 844 aa24.26■■□□□ 1.47
PPM1F-208ENST00000496143 PGBD1Q96JS3 809 aa24.26■■□□□ 1.47
PPM1F-208ENST00000496143 MXRA8Q9BRK3 442 aa24.26■■□□□ 1.47
PPM1F-208ENST00000496143 ALG1Q9BT22 464 aa24.26■■□□□ 1.47
PPM1F-208ENST00000496143 NOC4LQ9BVI4 516 aaKnown RBP24.26■■□□□ 1.47
PPM1F-208ENST00000496143 PFKFB2O60825 505 aa24.25■■□□□ 1.47
PPM1F-208ENST00000496143 CYP2C18P33260 490 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms