RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 CILP2Q8IUL8 1156 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 TEX2Q8IWB9 1127 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 TMEM169Q96HH4 297 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 MAGEC2Q9UBF1 373 aaPredicted RBP8.23□□□□□ -1.09
CCDC39-207ENST00000495817 SFMBT1Q9UHJ3 866 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 COA3Q9Y2R0 106 aaPredicted RBP8.23□□□□□ -1.09
CCDC39-207ENST00000495817 PCDHA5Q9Y5H7 936 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 IRAK3Q9Y616 596 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 IRS2Q9Y4H2 1338 aa8.23□□□□□ -1.09
CCDC39-207ENST00000495817 A0A087X0B3 334 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 ZC3H12DA2A288 527 aaKnown RBP8.22□□□□□ -1.09
CCDC39-207ENST00000495817 NTRK1P04629 796 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 PFKLP17858 780 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 FBLN1P23142 703 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-207ENST00000495817 AMPD3Q01432 767 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 KRTAP19-4Q3LI73 84 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 STYK1Q6J9G0 422 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 USP53Q70EK8 1073 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 MAMDC2Q7Z304 686 aaPredicted RBP8.22□□□□□ -1.09
CCDC39-207ENST00000495817 NLRP10Q86W26 655 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 THNSL2Q86YJ6 484 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 GSTCDQ8NEC7 633 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 SEC14L1Q92503 715 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 PTPRN2Q92932 1015 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 TRMT2BQ96GJ1 504 aaKnown RBP8.22□□□□□ -1.09
CCDC39-207ENST00000495817 SGPP1Q9BX95 441 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 BTG4Q9NY30 223 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 PCDHA2Q9Y5H9 948 aa8.22□□□□□ -1.09
CCDC39-207ENST00000495817 NPIPB6E9PJ23 425 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 MYCLP1P12525 358 aaPredicted RBP8.21□□□□□ -1.1
CCDC39-207ENST00000495817 STAT3P40763 770 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 BCL6P41182 706 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 EPHB3P54753 998 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 JAG1P78504 1218 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 CHRNA2Q15822 529 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 NTRK3Q16288 839 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 CEP68Q76N32 757 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 ZSCAN18Q8TBC5 510 aaPredicted RBP8.21□□□□□ -1.1
CCDC39-207ENST00000495817 CHAC2Q8WUX2 184 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 PHF20Q9BVI0 1012 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 CNOT6Q9ULM6 557 aaKnown RBP8.21□□□□□ -1.1
CCDC39-207ENST00000495817 MAPRE3Q9UPY8 281 aa8.21□□□□□ -1.1
CCDC39-207ENST00000495817 FPR2P25090 351 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 ZNF385BQ569K4 471 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 CIAPIN1Q6FI81 312 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 IGDCC3Q8IVU1 814 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.2□□□□□ -1.1
CCDC39-207ENST00000495817 SLC7A14Q8TBB6 771 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 ALG3Q92685 438 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 CAAP1Q9H8G2 361 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 SLC52A2Q9HAB3 445 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 TRIM39Q9HCM9 518 aa8.2□□□□□ -1.1
CCDC39-207ENST00000495817 PDE8AO60658 829 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 LCP1P13796 627 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 CDK11BP21127 795 aaKnown RBP8.19□□□□□ -1.1
CCDC39-207ENST00000495817 IGFBP6P24592 240 aaPredicted RBP8.19□□□□□ -1.1
CCDC39-207ENST00000495817 SOX5P35711 763 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 KIZQ2M2Z5 673 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 LRRTM3Q86VH5 581 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 LRRC56Q8IYG6 542 aaPredicted RBP8.19□□□□□ -1.1
CCDC39-207ENST00000495817 CPA5Q8WXQ8 436 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 EPB41L1Q9H4G0 881 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 NDOR1Q9UHB4 597 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 FBXL7Q9UJT9 491 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 HCFC2Q9Y5Z7 792 aa8.19□□□□□ -1.1
CCDC39-207ENST00000495817 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.18□□□□□ -1.1
CCDC39-207ENST00000495817 GSG1L2A8MUP6 293 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 DGKIO75912 1065 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 NCAM1P13591 858 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 SDSP20132 328 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 GPR85P60893 370 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 TMEM151BQ8IW70 566 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 CHAMP1Q96JM3 812 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 CLDND1Q9NY35 253 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 ZNF652Q9Y2D9 606 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 KCTD3Q9Y597 815 aa8.18□□□□□ -1.1
CCDC39-207ENST00000495817 BLACEA4D250 179 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 AQP7O14520 342 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 NUAK1O60285 661 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 BUB1BO60566 1050 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-207ENST00000495817 DNAJC8O75937 253 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-207ENST00000495817 ASLP04424 464 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 NAT1P18440 290 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 POU3F2P20265 443 aaPredicted RBP8.17□□□□□ -1.1
CCDC39-207ENST00000495817 EMC4Q5J8M3 183 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 LBX2Q6XYB7 198 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 BRAPQ7Z569 592 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 AMIGO3Q86WK7 504 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 RPUSD2Q8IZ73 545 aaKnown RBP8.17□□□□□ -1.1
CCDC39-207ENST00000495817 PPM1KQ8N3J5 372 aa8.17□□□□□ -1.1
CCDC39-207ENST00000495817 DDX1Q92499 740 aaKnown RBP8.17□□□□□ -1.1
CCDC39-207ENST00000495817 MAFKO60675 156 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 ASGR2P07307 311 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 PI3P19957 117 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 PMLP29590 882 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 CNGA1P29973 690 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 SSPNQ14714 243 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 LCE3BQ5TA77 95 aa8.16□□□□□ -1.1
CCDC39-207ENST00000495817 CYP4F22Q6NT55 531 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms