RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 PASKQ96RG2 1323 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 GTPBP6O43824 516 aaPredicted RBP27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 AFMP43652 599 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 GCLCP48506 637 aaPredicted RBP27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 CCNA1P78396 465 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 UVSSAQ2YD98 709 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 NT5DC1Q5TFE4 455 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 LRCH2Q5VUJ6 765 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 SMC1BQ8NDV3 1235 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 SHCBP1Q8NEM2 672 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 ERCC4Q92889 916 aaPredicted RBP27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 MROH8Q9H579 483 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 PCDHA5Q9Y5H7 936 aa27.41■■□□□ 1.98
PPP1R3F-205ENST00000495799 ZNF157P51786 506 aaPredicted RBP27.4■■□□□ 1.98
PPP1R3F-205ENST00000495799 AMPD3Q01432 767 aa27.4■■□□□ 1.98
PPP1R3F-205ENST00000495799 IL31RAQ8NI17 732 aa27.4■■□□□ 1.98
PPP1R3F-205ENST00000495799 IWS1Q96ST2 819 aa27.4■■□□□ 1.98
PPP1R3F-205ENST00000495799 PARK7Q99497 189 aaKnown RBP27.4■■□□□ 1.98
PPP1R3F-205ENST00000495799 RIT2Q99578 217 aa27.4■■□□□ 1.98
PPP1R3F-205ENST00000495799 TEKT3Q9BXF9 490 aa27.4■■□□□ 1.98
PPP1R3F-205ENST00000495799 FOXN1O15353 648 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 GAS7O60861 476 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 MYCLP12524 364 aaPredicted RBP27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 ITGB5P18084 799 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 ERCC3P19447 782 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 CCT6AP40227 531 aaKnown RBP27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 ERVK-9P63128 1117 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 ERVK-24P63145 666 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 GRB10Q13322 594 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 HYIQ5T013 277 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 NCAPH2Q6IBW4 605 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 NLRX1Q86UT6 975 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 RNF214Q8ND24 703 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 LRRC27Q9C0I9 530 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 ADD3Q9UEY8 706 aaKnown RBP27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 VAV3Q9UKW4 847 aa27.39■■□□□ 1.98
PPP1R3F-205ENST00000495799 MANSC4A6NHS7 340 aaPredicted RBP27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 B4DLN1 442 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 PSMD10O75832 226 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 NR3C2P08235 984 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 PRR29P0C7W0 189 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 MRPS9P82933 396 aaKnown RBP27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 SPIRE1Q08AE8 756 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 PPP2R5CQ13362 524 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 MTMR1Q13613 665 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 TMEM119Q4V9L6 283 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 NAALADL2Q58DX5 795 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 RGMBQ6NW40 437 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 VSIG10LQ86VR7 867 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 RASAL3Q86YV0 1011 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 GRAMD1CQ8IYS0 662 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 ANP32BQ92688 251 aaKnown RBP27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 GJA10Q969M2 543 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 GSDMAQ96QA5 445 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 MPHOSPH6Q99547 160 aaKnown RBP27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 DNAJC25Q9H1X3 360 aa27.38■■□□□ 1.97
PPP1R3F-205ENST00000495799 TESPA1A2RU30 521 aaPredicted RBP27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 IPO5O00410 1097 aaKnown RBP27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 SARSP49591 514 aaKnown RBP27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 DPYDQ12882 1025 aa27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 KCTD17Q8N5Z5 321 aa27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 SPATA20Q8TB22 786 aa27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 TXNRD2Q9NNW7 524 aa27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 ZCCHC17Q9NP64 241 aaKnown RBP27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 KBTBD4Q9NVX7 518 aa27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 RMND1Q9NWS8 449 aa27.37■■□□□ 1.97
PPP1R3F-205ENST00000495799 POTEB2H3BUK9 544 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 BIN1O00499 593 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 MAFGO15525 162 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 ARP10275 920 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 ZNF165P49910 485 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 SEMA3FQ13275 785 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 SAPCD2Q86UD0 394 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 GPRC5AQ8NFJ5 357 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 GPRASP2Q96D09 838 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 CDHR1Q96JP9 859 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 PNMA5Q96PV4 448 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 PLIN2Q99541 437 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 KCNH7Q9NS40 1196 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 DACH1Q9UI36 760 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 CYP2C8P10632 490 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 XRCC6P12956 609 aaKnown RBP eCLIP27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 SV2BQ7L1I2 683 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 OTOP1Q7RTM1 612 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 AGO4Q9HCK5 861 aaKnown RBP27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 TBC1D22BQ9NU19 505 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 TCEAL9Q9UHQ7 104 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 MAN1B1Q9UKM7 699 aa27.36■■□□□ 1.97
PPP1R3F-205ENST00000495799 LCTP09848 1927 aa27.35■■□□□ 1.97
PPP1R3F-205ENST00000495799 KCTD2Q14681 263 aa27.35■■□□□ 1.97
PPP1R3F-205ENST00000495799 GNPTABQ3T906 1256 aa27.35■■□□□ 1.97
PPP1R3F-205ENST00000495799 LARP4BQ92615 738 aaKnown RBP27.35■■□□□ 1.97
PPP1R3F-205ENST00000495799 CCDC47Q96A33 483 aaKnown RBP27.35■■□□□ 1.97
PPP1R3F-205ENST00000495799 UIMC1Q96RL1 719 aa27.35■■□□□ 1.97
PPP1R3F-205ENST00000495799 KIF3CO14782 793 aa27.34■■□□□ 1.97
PPP1R3F-205ENST00000495799 RPA1P27694 616 aa27.34■■□□□ 1.97
PPP1R3F-205ENST00000495799 RAD54LQ92698 747 aa27.34■■□□□ 1.97
PPP1R3F-205ENST00000495799 PURBQ96QR8 312 aaKnown RBP27.34■■□□□ 1.97
PPP1R3F-205ENST00000495799 MMP19Q99542 508 aa27.34■■□□□ 1.97
PPP1R3F-205ENST00000495799 BPIFA3Q9BQP9 254 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms