RNA–Protein interactions for RNA: ENST00000495327.1

RBM28-208, Transcript of RNA binding motif protein 28, humanhuman

TSL 2

Gene RBM28, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-208ENST00000495327 PPIGQ13427 754 aaKnown RBP eCLIP15.32■□□□□ 0.048e-12■■□□□ 14.2
RBM28-208ENST00000495327 CELF3Q5SZQ8 465 aaKnown RBP15.32■□□□□ 0.04
RBM28-208ENST00000495327 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
RBM28-208ENST00000495327 RUFY3Q7L099 469 aa15.32■□□□□ 0.04
RBM28-208ENST00000495327 SESTD1Q86VW0 696 aa15.32■□□□□ 0.04
RBM28-208ENST00000495327 TMEM199Q8N511 208 aa15.32■□□□□ 0.04
RBM28-208ENST00000495327 NOC4LQ9BVI4 516 aaKnown RBP15.32■□□□□ 0.04
RBM28-208ENST00000495327 KATNAL1Q9BW62 490 aa15.32■□□□□ 0.04
RBM28-208ENST00000495327 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
RBM28-208ENST00000495327 BARHL2Q9NY43 387 aa15.32■□□□□ 0.04
RBM28-208ENST00000495327 TRIP12Q14669 1992 aaPredicted RBP15.32■□□□□ 0.04
RBM28-208ENST00000495327 SPDYE3A6NKU9 549 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 SPATA31C2B4DYI2 1134 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 STXBP3O00186 592 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 ADD1P35611 737 aaKnown RBP15.31■□□□□ 0.04
RBM28-208ENST00000495327 SP2Q02086 613 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 SEMA3FQ13275 785 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 UBE2SQ16763 222 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 HSDL1Q3SXM5 330 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 KAT2BQ92831 832 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 EHMT1Q9H9B1 1298 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 RIC8AQ9NPQ8 531 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 TRMT13Q9NUP7 481 aaKnown RBP15.31■□□□□ 0.04
RBM28-208ENST00000495327 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
RBM28-208ENST00000495327 GBF1Q92538 1859 aa15.31■□□□□ 0.04
RBM28-208ENST00000495327 HAS3O00219 553 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 PPFIA4O75335 1185 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 CYP2C18P33260 490 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 TOB2Q14106 344 aaPredicted RBP15.3■□□□□ 0.04
RBM28-208ENST00000495327 NEDD9Q14511 834 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 PFKFB3Q16875 520 aaPredicted RBP15.3■□□□□ 0.04
RBM28-208ENST00000495327 UMODL1Q5DID0 1318 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 FAM47CQ5HY64 1035 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 PSRC1Q6PGN9 363 aaPredicted RBP15.3■□□□□ 0.04
RBM28-208ENST00000495327 METTL7BQ6UX53 244 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 NLRX1Q86UT6 975 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 GPRASP2Q96D09 838 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 ZFP91Q96JP5 570 aaPredicted RBP15.3■□□□□ 0.04
RBM28-208ENST00000495327 RNPC3Q96LT9 517 aaKnown RBP15.3■□□□□ 0.04
RBM28-208ENST00000495327 SPATA33Q96N06 139 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 SENP7Q9BQF6 1050 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 GLT8D2Q9H1C3 349 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 WNT8AQ9H1J5 351 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 PCDHA6Q9UN73 950 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 PCDHA8Q9Y5H6 950 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 CYP46A1Q9Y6A2 500 aa15.3■□□□□ 0.04
RBM28-208ENST00000495327 V9GY48 417 aaPredicted RBP15.3■□□□□ 0.04
RBM28-208ENST00000495327 PITPNM1O00562 1244 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 ZNF286BP0CG31 522 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 SCG2P13521 617 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 CSF2RAP15509 400 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 ADCY7P51828 1080 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 NTRK3Q16288 839 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 CDHR1Q96JP9 859 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.29■□□□□ 0.043e-8■□□□□ 9.8
RBM28-208ENST00000495327 RNF26Q9BY78 433 aaPredicted RBP15.29■□□□□ 0.04
RBM28-208ENST00000495327 MLXIPQ9HAP2 919 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 IL23AQ9NPF7 189 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 RTEL1Q9NZ71 1219 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 GTF2IRD1Q9UHL9 959 aa15.29■□□□□ 0.04
RBM28-208ENST00000495327 ESYT2A0FGR8 921 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 PRPF3O43395 683 aaKnown RBP15.28■□□□□ 0.04
RBM28-208ENST00000495327 EIF5BO60841 1220 aaKnown RBP15.28■□□□□ 0.04
RBM28-208ENST00000495327 FOSP01100 380 aaPredicted RBP15.28■□□□□ 0.04
RBM28-208ENST00000495327 CYP2C9P11712 490 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 IFNAR1P17181 557 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 PDIA3P30101 505 aaKnown RBP15.28■□□□□ 0.04
RBM28-208ENST00000495327 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
RBM28-208ENST00000495327 PSEN2P49810 448 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 ANAPC15P60006 121 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 SMAD3P84022 425 aaKnown RBP15.28■□□□□ 0.04
RBM28-208ENST00000495327 AP3B2Q13367 1082 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 MFSD10Q14728 455 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 TMEM240Q5SV17 173 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 GIMAP8Q8ND71 665 aaPredicted RBP15.28■□□□□ 0.04
RBM28-208ENST00000495327 UBIAD1Q9Y5Z9 338 aa15.28■□□□□ 0.04
RBM28-208ENST00000495327 KAT6AQ92794 2004 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 COL6A3P12111 3177 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 SMCO2A6NFE2 343 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 NOP56O00567 594 aaKnown RBP15.27■□□□□ 0.04
RBM28-208ENST00000495327 RBL2Q08999 1139 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 PKN1Q16512 942 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 KIAA0753Q2KHM9 967 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 RASIP1Q5U651 963 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
RBM28-208ENST00000495327 GDF6Q6KF10 455 aaPredicted RBP15.27■□□□□ 0.04
RBM28-208ENST00000495327 C16orf59Q7L2K0 433 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 CYFIP1Q7L576 1253 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 CCDC12Q8WUD4 166 aaPredicted RBP15.27■□□□□ 0.04
RBM28-208ENST00000495327 IL17RAQ96F46 866 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 C16orf70Q9BSU1 422 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 ANO3Q9BYT9 981 aa15.27■□□□□ 0.04
RBM28-208ENST00000495327 UPF3BQ9BZI7 483 aaKnown RBP15.27■□□□□ 0.04
RBM28-208ENST00000495327 CHD9Q3L8U1 2897 aa15.26■□□□□ 0.03
RBM28-208ENST00000495327 MAFGO15525 162 aa15.26■□□□□ 0.03
RBM28-208ENST00000495327 SORBS3O60504 671 aa15.26■□□□□ 0.03
RBM28-208ENST00000495327 LGALS2P05162 132 aa15.26■□□□□ 0.03
RBM28-208ENST00000495327 PFKMP08237 780 aa15.26■□□□□ 0.03
RBM28-208ENST00000495327 KCNA2P16389 499 aa15.26■□□□□ 0.03
RBM28-208ENST00000495327 ITGB5P18084 799 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms