RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 NOC4LQ9BVI4 516 aaKnown RBP20.67■□□□□ 0.9
COL20A1-207ENST00000494913 AGXT2Q9BYV1 514 aa20.67■□□□□ 0.9
COL20A1-207ENST00000494913 MLXIPQ9HAP2 919 aa20.67■□□□□ 0.9
COL20A1-207ENST00000494913 MYH7BA7E2Y1 1941 aa20.66■□□□□ 0.9
COL20A1-207ENST00000494913 UMODL1Q5DID0 1318 aa20.66■□□□□ 0.9
COL20A1-207ENST00000494913 SPATA31C2B4DYI2 1134 aa20.66■□□□□ 0.9
COL20A1-207ENST00000494913 CYP2C9P11712 490 aa20.66■□□□□ 0.9
COL20A1-207ENST00000494913 XRRA1Q6P2D8 792 aa20.66■□□□□ 0.9
COL20A1-207ENST00000494913 KAT2BQ92831 832 aa20.66■□□□□ 0.9
COL20A1-207ENST00000494913 BCAS3Q9H6U6 928 aa20.66■□□□□ 0.9
COL20A1-207ENST00000494913 ZSWIM6Q9HCJ5 1215 aa20.66■□□□□ 0.9
COL20A1-207ENST00000494913 SPDYE3A6NKU9 549 aa20.65■□□□□ 0.9
COL20A1-207ENST00000494913 PPFIA4O75335 1185 aa20.65■□□□□ 0.9
COL20A1-207ENST00000494913 ICAM3P32942 547 aa20.65■□□□□ 0.9
COL20A1-207ENST00000494913 PTPN11Q06124 597 aaPredicted RBP20.65■□□□□ 0.9
COL20A1-207ENST00000494913 HSDL1Q3SXM5 330 aa20.65■□□□□ 0.9
COL20A1-207ENST00000494913 TYW1BQ6NUM6 668 aa20.65■□□□□ 0.9
COL20A1-207ENST00000494913 GPR153Q6NV75 609 aa20.65■□□□□ 0.9
COL20A1-207ENST00000494913 C16orf59Q7L2K0 433 aa20.65■□□□□ 0.9
COL20A1-207ENST00000494913 RNPC3Q96LT9 517 aaKnown RBP20.65■□□□□ 0.9
COL20A1-207ENST00000494913 CYP46A1Q9Y6A2 500 aa20.65■□□□□ 0.9
COL20A1-207ENST00000494913 FIBPO43427 364 aa20.64■□□□□ 0.89
COL20A1-207ENST00000494913 ZNF286BP0CG31 522 aa20.64■□□□□ 0.89
COL20A1-207ENST00000494913 CCL23P55773 120 aa20.64■□□□□ 0.89
COL20A1-207ENST00000494913 RIC8AQ9NPQ8 531 aa20.64■□□□□ 0.89
COL20A1-207ENST00000494913 BARHL2Q9NY43 387 aa20.64■□□□□ 0.89
COL20A1-207ENST00000494913 PCDHA6Q9UN73 950 aa20.64■□□□□ 0.89
COL20A1-207ENST00000494913 PCDHA8Q9Y5H6 950 aa20.64■□□□□ 0.89
COL20A1-207ENST00000494913 hCG_1984214I3L0E3 225 aa20.63■□□□□ 0.89
COL20A1-207ENST00000494913 STXBP3O00186 592 aa20.63■□□□□ 0.89
COL20A1-207ENST00000494913 ACRP10323 421 aa20.63■□□□□ 0.89
COL20A1-207ENST00000494913 SEMA3FQ13275 785 aa20.63■□□□□ 0.89
COL20A1-207ENST00000494913 NEDD9Q14511 834 aa20.63■□□□□ 0.89
COL20A1-207ENST00000494913 PPP1R18Q6NYC8 613 aa20.63■□□□□ 0.89
COL20A1-207ENST00000494913 CYFIP1Q7L576 1253 aa20.63■□□□□ 0.89
COL20A1-207ENST00000494913 ZNF713Q8N859 430 aaPredicted RBP20.63■□□□□ 0.89
COL20A1-207ENST00000494913 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.63■□□□□ 0.89
COL20A1-207ENST00000494913 NOD1Q9Y239 953 aa20.63■□□□□ 0.89
COL20A1-207ENST00000494913 SMCO2A6NFE2 343 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 HOXD8P13378 290 aaPredicted RBP20.62■□□□□ 0.89
COL20A1-207ENST00000494913 PDIA3P30101 505 aaKnown RBP20.62■□□□□ 0.89
COL20A1-207ENST00000494913 PSEN2P49810 448 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 ADCY7P51828 1080 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 Q7L0L9 218 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 NLRX1Q86UT6 975 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 DEFB123Q8N688 67 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 ALG1Q9BT22 464 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 KATNAL1Q9BW62 490 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 UPF3BQ9BZI7 483 aaKnown RBP20.62■□□□□ 0.89
COL20A1-207ENST00000494913 TM6SF1Q9BZW5 370 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 IL23AQ9NPF7 189 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 F2P00734 622 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 SCG2P13521 617 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 EVCP57679 992 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 CCT2P78371 535 aaKnown RBP20.62■□□□□ 0.89
COL20A1-207ENST00000494913 TOB2Q14106 344 aaPredicted RBP20.62■□□□□ 0.89
COL20A1-207ENST00000494913 MFSD10Q14728 455 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 PTGISQ16647 500 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 PFKFB3Q16875 520 aaPredicted RBP20.62■□□□□ 0.89
COL20A1-207ENST00000494913 KIAA0753Q2KHM9 967 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 TMEM240Q5SV17 173 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 ZNF365Q70YC5 407 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 C7orf31Q8N865 590 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 WNT8AQ9H1J5 351 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 EHMT1Q9H9B1 1298 aa20.62■□□□□ 0.89
COL20A1-207ENST00000494913 NID2Q14112 1375 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 NOP56O00567 594 aaKnown RBP20.61■□□□□ 0.89
COL20A1-207ENST00000494913 PRPF3O43395 683 aaKnown RBP20.61■□□□□ 0.89
COL20A1-207ENST00000494913 PPFIA3O75145 1194 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 ITGB5P18084 799 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 GDF6Q6KF10 455 aaPredicted RBP20.61■□□□□ 0.89
COL20A1-207ENST00000494913 METTL7BQ6UX53 244 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 SESTD1Q86VW0 696 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 PHKBQ93100 1093 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 SCLYQ96I15 445 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 SENP7Q9BQF6 1050 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 LARP6Q9BRS8 491 aaKnown RBP20.61■□□□□ 0.89
COL20A1-207ENST00000494913 NCOA5Q9HCD5 579 aaKnown RBP20.61■□□□□ 0.89
COL20A1-207ENST00000494913 HDAC6Q9UBN7 1215 aa20.61■□□□□ 0.89
COL20A1-207ENST00000494913 HAS3O00219 553 aa20.6■□□□□ 0.89
COL20A1-207ENST00000494913 FOSP01100 380 aaPredicted RBP20.6■□□□□ 0.89
COL20A1-207ENST00000494913 AKAP17AQ02040 695 aaKnown RBP20.6■□□□□ 0.89
COL20A1-207ENST00000494913 NTRK3Q16288 839 aa20.6■□□□□ 0.89
COL20A1-207ENST00000494913 PSRC1Q6PGN9 363 aaPredicted RBP20.6■□□□□ 0.89
COL20A1-207ENST00000494913 TEX2Q8IWB9 1127 aa20.6■□□□□ 0.89
COL20A1-207ENST00000494913 GPRASP2Q96D09 838 aa20.6■□□□□ 0.89
COL20A1-207ENST00000494913 PGBD1Q96JS3 809 aa20.6■□□□□ 0.89
COL20A1-207ENST00000494913 C16orf70Q9BSU1 422 aa20.6■□□□□ 0.89
COL20A1-207ENST00000494913 GLT8D2Q9H1C3 349 aa20.6■□□□□ 0.89
COL20A1-207ENST00000494913 UBIAD1Q9Y5Z9 338 aa20.6■□□□□ 0.89
COL20A1-207ENST00000494913 SMAD3P84022 425 aaKnown RBP20.59■□□□□ 0.89
COL20A1-207ENST00000494913 SP4Q02446 784 aa20.59■□□□□ 0.89
COL20A1-207ENST00000494913 PKN1Q16512 942 aa20.59■□□□□ 0.89
COL20A1-207ENST00000494913 CDHR1Q96JP9 859 aa20.59■□□□□ 0.89
COL20A1-207ENST00000494913 PDRG1Q9NUG6 133 aa20.59■□□□□ 0.89
COL20A1-207ENST00000494913 TMEM260Q9NX78 707 aa20.59■□□□□ 0.89
COL20A1-207ENST00000494913 GTF2IRD1Q9UHL9 959 aa20.59■□□□□ 0.89
COL20A1-207ENST00000494913 ATP9AO75110 1047 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 FGBP02675 491 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 BFSP2Q13515 415 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms