RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 MCF2L2Q86YR7 1114 aa20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 TRMT44Q8IYL2 757 aaKnown RBP20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 SMYD4Q8IYR2 804 aaPredicted RBP20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.7■□□□□ 0.911e-7■■■□□ 19.2
TSPAN4-212ENST00000494815 DCPSQ96C86 337 aaKnown RBP20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 LRRC27Q9C0I9 530 aa20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 RABGAP1Q9Y3P9 1069 aa20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 STK24Q9Y6E0 443 aa20.7■□□□□ 0.91
TSPAN4-212ENST00000494815 SERPINC1P01008 464 aa20.7■□□□□ 0.9
TSPAN4-212ENST00000494815 KCNJ6P48051 423 aa20.7■□□□□ 0.9
TSPAN4-212ENST00000494815 KLHL10Q6JEL2 608 aa20.7■□□□□ 0.9
TSPAN4-212ENST00000494815 SAMD3Q8N6K7 520 aa20.7■□□□□ 0.9
TSPAN4-212ENST00000494815 RAD54LQ92698 747 aa20.7■□□□□ 0.9
TSPAN4-212ENST00000494815 GJA10Q969M2 543 aa20.7■□□□□ 0.9
TSPAN4-212ENST00000494815 L2HGDHQ9H9P8 463 aa20.7■□□□□ 0.9
TSPAN4-212ENST00000494815 SPIRE1Q08AE8 756 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 DHX8Q14562 1220 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 E4F1Q66K89 784 aaPredicted RBP20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 SULF1Q8IWU6 871 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 NUDT12Q9BQG2 462 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 MAP3K20Q9NYL2 800 aaKnown RBP20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 RWDD2AQ9UIY3 292 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 IGLV3-22A0A075B6J6 115 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 ZBED4O75132 1171 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 UBASH3AP57075 661 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 HAUS3Q68CZ6 603 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 CNNM4Q6P4Q7 775 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 CLEC4DQ8WXI8 215 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 FZD1Q9UP38 647 aa20.69■□□□□ 0.9
TSPAN4-212ENST00000494815 MSH4O15457 936 aa20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 CCT6AP40227 531 aaKnown RBP20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 PAK1Q13153 545 aa20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 DPY19L2Q6NUT2 758 aa20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 GIMAP8Q8ND71 665 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 L3MBTL3Q96JM7 780 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 PPP1R13BQ96KQ4 1090 aa20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 CTDP1Q9Y5B0 961 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 USP2O75604 605 aaPredicted RBP20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 ASIC1P78348 528 aa20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 ERMNQ8TAM6 284 aa20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 CTNND2Q9UQB3 1225 aa20.68■□□□□ 0.9
TSPAN4-212ENST00000494815 POLR2AP24928 1970 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 VWA5AO00534 786 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 TUBB4AP04350 444 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 CDK11BP21127 795 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 HMGCS2P54868 508 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 STIM1Q13586 685 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 MCM6Q14566 821 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 CPXCR1Q8N123 301 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 ADSSL1Q8N142 457 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 RAVER2Q9HCJ3 691 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 EXOC1Q9NV70 894 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 GDAQ9Y2T3 454 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 PHIPQ8WWQ0 1821 aa20.67■□□□□ 0.9
TSPAN4-212ENST00000494815 PVALEFA0A1B0GWK0 134 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 PPP1R2P41236 205 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 PRCPP42785 496 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 ARMCX5Q6P1M9 558 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 TMC6Q7Z403 805 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 SAMSN1Q9NSI8 373 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 AFG3L2Q9Y4W6 797 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 NFIBO00712 420 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 ALAS1P13196 640 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 HOXA7P31268 230 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 STX17P56962 302 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 FAM193AP78312 1265 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 SETQ01105 290 aaPredicted RBP20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 ECM1Q16610 540 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 CEP55Q53EZ4 464 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 CDKAL1Q5VV42 579 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 CYP2W1Q8TAV3 490 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 RBM46Q8TBY0 533 aaKnown RBP20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 TMOD4Q9NZQ9 345 aa20.66■□□□□ 0.9
TSPAN4-212ENST00000494815 NRDCO43847 1150 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 PPP1R12BO60237 982 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 H2AFXP16104 143 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 SFPQP23246 707 aaKnown RBP eCLIP20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 OAZ1P54368 228 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 MAP3K9P80192 1104 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 KCNK18Q7Z418 384 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 NELFBQ8WX92 580 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 VAV3Q9UKW4 847 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 RPTORQ8N122 1335 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 ZC3H4Q9UPT8 1303 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 PARP14Q460N5 1801 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 MYMKA6NI61 221 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 PDE4DQ08499 809 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 COBLL1Q53SF7 1204 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 USP50Q70EL3 339 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 UNC13DQ70J99 1090 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 ZC3H15Q8WU90 426 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 ATG4CQ96DT6 458 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 ZNF446Q9NWS9 450 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 ADAMTS5Q9UNA0 930 aa20.65■□□□□ 0.9
TSPAN4-212ENST00000494815 PSMA7O14818 248 aa20.64■□□□□ 0.89
TSPAN4-212ENST00000494815 RPA1P27694 616 aa20.64■□□□□ 0.89
TSPAN4-212ENST00000494815 STAT3P40763 770 aa20.64■□□□□ 0.89
TSPAN4-212ENST00000494815 SH3D19Q5HYK7 790 aa20.64■□□□□ 0.89
TSPAN4-212ENST00000494815 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-212ENST00000494815 KCTD17Q8N5Z5 321 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms