RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 C22orf34Q6ZV56 151 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 C16orf59Q7L2K0 433 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 FAM214BQ7L5A3 538 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 PNMA8AQ86V59 439 aaPredicted RBP5.45□□□□□ -1.54
CMSS1-207ENST00000494412 CPNE8Q86YQ8 564 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 Q8N3U1 123 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 SLC5A5Q92911 643 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 MMP19Q99542 508 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 KCNJ15Q99712 375 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 FOXP3Q9BZS1 431 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 TRIT1Q9H3H1 467 aaKnown RBP5.45□□□□□ -1.54
CMSS1-207ENST00000494412 LRRC4CQ9HCJ2 640 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 AP5S1Q9NUS5 200 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 C14orf119Q9NWQ9 140 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 OXSMQ9NWU1 459 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 PIM2Q9P1W9 311 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 COMMD10Q9Y6G5 202 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 U3KQE9 123 aa5.45□□□□□ -1.54
CMSS1-207ENST00000494412 TRBV23OR9-2A0A075B6M9 112 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 IGF2BP3O00425 579 aaKnown RBP eCLIP5.44□□□□□ -1.54
CMSS1-207ENST00000494412 SRFP11831 508 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 CD97P48960 835 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 INAVAQ3KP66 663 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 RGL3Q3MIN7 710 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 CDKAL1Q5VV42 579 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 DUSP27Q5VZP5 1158 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 MBLAC2Q68D91 279 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 PGM2L1Q6PCE3 622 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 DGKHQ86XP1 1220 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 NAT16Q8N8M0 369 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 FAM181AQ8N9Y4 354 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 PANK1Q8TE04 598 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 CDADC1Q9BWV3 514 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 SLC13A1Q9BZW2 595 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 DUSP15Q9H1R2 295 aaPredicted RBP5.44□□□□□ -1.54
CMSS1-207ENST00000494412 CHST12Q9NRB3 414 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 OBP2AQ9NY56 170 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 FBXL7Q9UJT9 491 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 TCFL5Q9UL49 500 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 CBLCQ9ULV8 474 aa5.44□□□□□ -1.54
CMSS1-207ENST00000494412 WASH4PA8MWX3 477 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 H7C1D1 291 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 WNT9AO14904 365 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 FGF10O15520 208 aaPredicted RBP5.43□□□□□ -1.54
CMSS1-207ENST00000494412 CYP26A1O43174 497 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 COBLO75128 1261 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 U2AF1L5P0DN76 240 aaPredicted RBP5.43□□□□□ -1.54
CMSS1-207ENST00000494412 FOSL1P15407 271 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 KRT15P19012 456 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 RECQLP46063 649 aaPredicted RBP5.43□□□□□ -1.54
CMSS1-207ENST00000494412 SCAND1P57086 179 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 U2AF1Q01081 240 aaKnown RBP eCLIP5.43□□□□□ -1.54
CMSS1-207ENST00000494412 LSAMPQ13449 338 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 LRP8Q14114 963 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 CRY1Q16526 586 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 ARHGAP44Q17R89 818 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 CYP27C1Q4G0S4 372 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 ARTNQ5T4W7 220 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 BROXQ5VW32 411 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 ARHGAP27Q6ZUM4 889 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 TSPYL5Q86VY4 417 aaPredicted RBP5.43□□□□□ -1.54
CMSS1-207ENST00000494412 USHBP1Q8N6Y0 703 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 EFHBQ8N7U6 833 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 C1orf162Q8NEQ5 155 aaPredicted RBP5.43□□□□□ -1.54
CMSS1-207ENST00000494412 FAXDC2Q96IV6 333 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 PTCHD1Q96NR3 888 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 MKS1Q9NXB0 559 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 BTG4Q9NY30 223 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 CLDND1Q9NY35 253 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 ANKRD6Q9Y2G4 727 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 GIT1Q9Y2X7 761 aa5.43□□□□□ -1.54
CMSS1-207ENST00000494412 TIMM13Q9Y5L4 95 aaPredicted RBP5.43□□□□□ -1.54
CMSS1-207ENST00000494412 FZD9O00144 591 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 TGM5O43548 720 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 XPOTO43592 962 aaKnown RBP5.42□□□□□ -1.54
CMSS1-207ENST00000494412 ADAMTS4O75173 837 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 LDHAP00338 332 aaKnown RBP5.42□□□□□ -1.54
CMSS1-207ENST00000494412 CFBP00751 764 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 PDE6AP16499 860 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 TPP2P29144 1249 aaPredicted RBP5.42□□□□□ -1.54
CMSS1-207ENST00000494412 BCL6P41182 706 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 RPL11P62913 178 aaKnown RBP5.42□□□□□ -1.54
CMSS1-207ENST00000494412 CYP27A1Q02318 531 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 MINDY4Q4G0A6 757 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 CREB3L3Q68CJ9 461 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 CPA6Q8N4T0 437 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 SAMD3Q8N6K7 520 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 LINC00116Q8NCU8 138 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 CLIP3Q96DZ5 547 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 SCYL1Q96KG9 808 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 LRGUKQ96M69 825 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 METTL22Q9BUU2 404 aaPredicted RBP5.42□□□□□ -1.54
CMSS1-207ENST00000494412 BOCQ9BWV1 1114 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 PRDM11Q9NQV5 511 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 PCMTD2Q9NV79 361 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 ZSWIM5Q9P217 1185 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 ZC3H7BQ9UGR2 993 aaKnown RBP5.42□□□□□ -1.54
CMSS1-207ENST00000494412 ZBTB21Q9ULJ3 1066 aa5.42□□□□□ -1.54
CMSS1-207ENST00000494412 PNMA8BQ9ULN7 279 aaPredicted RBP5.42□□□□□ -1.54
CMSS1-207ENST00000494412 ZNF652Q9Y2D9 606 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms