RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 SYNRGQ9UMZ2 1314 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 DNAH12Q6ZR08 3092 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 hCG_1642624A0A1W2PR95 340 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 TK2O00142 265 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 DNM1LO00429 736 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 MEIS2O14770 477 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 DUSP11O75319 330 aaKnown RBP10.12□□□□□ -0.79
ITGB1-217ENST00000494395 CFBP00751 764 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 RARBP10826 455 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 CST5P28325 142 aaPredicted RBP10.12□□□□□ -0.79
ITGB1-217ENST00000494395 PDIA3P30101 505 aaKnown RBP10.12□□□□□ -0.79
ITGB1-217ENST00000494395 ADCYAP1R1P41586 468 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 TMEM63BQ5T3F8 832 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 GJC2Q5T442 439 aaPredicted RBP10.12□□□□□ -0.79
ITGB1-217ENST00000494395 PPP2R2DQ66LE6 453 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 CCDC82Q8N4S0 544 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 KLHDC9Q8NEP7 349 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 C11orf49Q9H6J7 331 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 XPNPEP3Q9NQH7 507 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 PXMP2Q9NR77 195 aa10.12□□□□□ -0.79
ITGB1-217ENST00000494395 SEC63Q9UGP8 760 aaKnown RBP10.12□□□□□ -0.79
ITGB1-217ENST00000494395 MYADML2A6NDP7 307 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 PIK3CDO00329 1044 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 EIF5BO60841 1220 aaKnown RBP10.11□□□□□ -0.79
ITGB1-217ENST00000494395 PGK1P00558 417 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 SMPD1P17405 629 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 PTGS1P23219 599 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 HOXA13P31271 388 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-217ENST00000494395 GJA9P57773 515 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 FGD1P98174 961 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 PKN1Q16512 942 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 LCE2DQ5TA82 110 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-217ENST00000494395 WWC2Q6AWC2 1192 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 IQSEC1Q6DN90 963 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 EEPD1Q7L9B9 569 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 ARRDC4Q8NCT1 418 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 IL31RAQ8NI17 732 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 NSUN6Q8TEA1 469 aaKnown RBP10.11□□□□□ -0.79
ITGB1-217ENST00000494395 ZNF274Q96GC6 653 aaPredicted RBP10.11□□□□□ -0.79
ITGB1-217ENST00000494395 IWS1Q96ST2 819 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 RMDN3Q96TC7 470 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 KIF2CQ99661 725 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 PDCD2LQ9BRP1 358 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 PDRG1Q9NUG6 133 aa10.11□□□□□ -0.79
ITGB1-217ENST00000494395 MYH7BA7E2Y1 1941 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 CCDC196A0A1B0GTZ2 297 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 GCOM1H8Y6P7 765 aaPredicted RBP10.1□□□□□ -0.79
ITGB1-217ENST00000494395 STXBP3O00186 592 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 HOXA2O43364 376 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 RGS20O76081 388 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 ARIH2O95376 493 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 POLR2MP0CAP2 368 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 IFNAR1P17181 557 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 EIF2AK2P19525 551 aaKnown RBP10.1□□□□□ -0.79
ITGB1-217ENST00000494395 USP46P62068 366 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 TNFAIP2Q03169 654 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 SNX17Q15036 470 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 PGM5Q15124 567 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 LRRC26Q2I0M4 334 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 CCDC62Q6P9F0 684 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 GPKOWQ92917 476 aaPredicted RBP eCLIP10.1□□□□□ -0.79
ITGB1-217ENST00000494395 TSEN34Q9BSV6 310 aaKnown RBP10.1□□□□□ -0.79
ITGB1-217ENST00000494395 HTATIP2Q9BUP3 242 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 NCOA5Q9HCD5 579 aaKnown RBP10.1□□□□□ -0.79
ITGB1-217ENST00000494395 PHF24Q9UPV7 400 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 Q9Y3F1 56 aa10.1□□□□□ -0.79
ITGB1-217ENST00000494395 V9GY48 417 aaPredicted RBP10.1□□□□□ -0.79
ITGB1-217ENST00000494395 DOCK5Q9H7D0 1870 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 SCN10AQ9Y5Y9 1956 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 B4DLN1 442 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 KBTBD13C9JR72 458 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 hCG_1984214I3L0E3 225 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 PRPF3O43395 683 aaKnown RBP10.09□□□□□ -0.79
ITGB1-217ENST00000494395 NR3C2P08235 984 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 MRPL12P52815 198 aaKnown RBP10.09□□□□□ -0.79
ITGB1-217ENST00000494395 AK2P54819 239 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 CCT2P78371 535 aaKnown RBP10.09□□□□□ -0.79
ITGB1-217ENST00000494395 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
ITGB1-217ENST00000494395 STXBP2Q15833 593 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 QPCTQ16769 361 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 PFKFB3Q16875 520 aaPredicted RBP10.09□□□□□ -0.79
ITGB1-217ENST00000494395 DUSP28Q4G0W2 176 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 ARHGEF16Q5VV41 709 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 PPP1R18Q6NYC8 613 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 USP17L6PQ6QN14 398 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 ADGRD1Q6QNK2 874 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 HEATR3Q7Z4Q2 680 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 RNF180Q86T96 592 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 TLK2Q86UE8 772 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 VSIG10LQ86VR7 867 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 ZNF713Q8N859 430 aaPredicted RBP10.09□□□□□ -0.79
ITGB1-217ENST00000494395 ZFRQ96KR1 1074 aaKnown RBP10.09□□□□□ -0.79
ITGB1-217ENST00000494395 WDR11Q9BZH6 1224 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 BARHL2Q9NY43 387 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 NAP1L2Q9ULW6 460 aaPredicted RBP10.09□□□□□ -0.79
ITGB1-217ENST00000494395 LTBP2Q14767 1821 aa10.09□□□□□ -0.79
ITGB1-217ENST00000494395 A0A1W2PQ45 241 aaPredicted RBP10.08□□□□□ -0.8
ITGB1-217ENST00000494395 A0A1W2PQY0 241 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 LILRB3O75022 631 aa10.08□□□□□ -0.8
ITGB1-217ENST00000494395 RNF40O75150 1001 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms