RNA–Protein interactions for RNA: ENST00000494000.1

FNDC3B-212, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 1 (best)

Gene FNDC3B, Length 2,600 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-212ENST00000494000 IQUBQ8NA54 791 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 CNNM3Q8NE01 707 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 TBCKQ8TEA7 893 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 WRNIP1Q96S55 665 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 MAP7D2Q96T17 732 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 SENP7Q9BQF6 1050 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 SLF1Q9BQI6 1058 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 RMI1Q9H9A7 625 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 CD248Q9HCU0 757 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 KIAA1468Q9P260 1216 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 CCDC39Q9UFE4 941 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 MRVI1Q9Y6F6 885 aa7.53□□□□□ -1.2
FNDC3B-212ENST00000494000 WDR90Q96KV7 1748 aa7.52□□□□□ -1.2
FNDC3B-212ENST00000494000 CYP3A7-CYP3A51PA0A087WV96 503 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 SPDYE3A6NKU9 549 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 TBX3O15119 743 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 EIF3JO75822 258 aaKnown RBP7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 SMC2O95347 1197 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 PTPRAP18433 802 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 CYP3A7P24462 503 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 BACE1P56817 501 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 MAP3K9P80192 1104 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 PDIA5Q14554 519 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 EARS2Q5JPH6 523 aaKnown RBP7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 GAS2L3Q86XJ1 694 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 CEP57L1Q8IYX8 460 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 C4orf32Q8N8J7 132 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 FAM200AQ8TCP9 573 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 CCSER1Q9C0I3 900 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 CPVLQ9H3G5 476 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 PPCSQ9HAB8 311 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 TMOD4Q9NZQ9 345 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 BIN2Q9UBW5 565 aaPredicted RBP7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 DACH1Q9UI36 760 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 CSADQ9Y600 493 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 ZBED4O75132 1171 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 ICAM1P05362 532 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 HIRAP54198 1017 aaPredicted RBP7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 POU5F1Q01860 360 aaKnown RBP7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 GHRHRQ02643 423 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 CCDC173Q0VFZ6 552 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 KCTD2Q14681 263 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 TKFCQ3LXA3 575 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 SH3D19Q5HYK7 790 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 ODR4Q5SWX8 454 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 TMC2Q8TDI7 906 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 SCYL1Q96KG9 808 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 BPIFA3Q9BQP9 254 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 CSRNP2Q9H175 543 aa7.52□□□□□ -1.21
FNDC3B-212ENST00000494000 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 CCNT1O60563 726 aaKnown RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 PPP1R11O60927 126 aaPredicted RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 CYP3A4P08684 503 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 SLFN14P0C7P3 912 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 SLURP2P0DP57 97 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 EPHX2P34913 555 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 FXR2P51116 673 aaKnown RBP eCLIP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 CAMK4Q16566 473 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 SHROOM1Q2M3G4 852 aaPredicted RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 LETM2Q2VYF4 491 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 JAKMIP3Q5VZ66 844 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 RASGRP2Q7LDG7 609 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 SLFN12Q8IYM2 578 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 MBOAT7Q96N66 472 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 TCEAL9Q9UHQ7 104 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 BAZ2BQ9UIF8 2168 aaKnown RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 TUBE1Q9UJT0 475 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 VWA3AA6NCI4 1184 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 FAM205CA6NFA0 338 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 GCOM1H8Y6P7 765 aaPredicted RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 ZRANB2O95218 330 aaKnown RBP eCLIP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 POLR2MP0CAP2 368 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 XRCC6P12956 609 aaKnown RBP eCLIP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 CIITAP33076 1130 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 NAP1L1P55209 391 aaKnown RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 TPM4P67936 248 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 SETDB1Q15047 1291 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 CALCRLQ16602 461 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 CDAN1Q8IWY9 1227 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 RASGRP4Q8TDF6 673 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 KIFC2Q96AC6 838 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 TRIM44Q96DX7 344 aaPredicted RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 CLIC6Q96NY7 704 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 NUP88Q99567 741 aaPredicted RBP7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 ANO3Q9BYT9 981 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 RBSNQ9H1K0 784 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 PPP1R9AQ9ULJ8 1098 aa7.51□□□□□ -1.21
FNDC3B-212ENST00000494000 POLR2DO15514 142 aaKnown RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 INPP5BP32019 993 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 SREBF1P36956 1147 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 UBA7P41226 1012 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 NLRP12P59046 1061 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 PPATQ06203 517 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 Q4G0T1 1027 aa7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 ZC3H12AQ5D1E8 599 aaKnown RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 DNAJC21Q5F1R6 531 aaKnown RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 DNTTIP2Q5QJE6 756 aaKnown RBP7.5□□□□□ -1.21
FNDC3B-212ENST00000494000 NT5DC1Q5TFE4 455 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms