RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 NEDD1Q8NHV4 660 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 MKL1Q969V6 931 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 MTA3Q9BTC8 594 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 CLIP2Q9UDT6 1046 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 FEM1BQ9UK73 627 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 PHF24Q9UPV7 400 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 CNPY2Q9Y2B0 182 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 MCM3APO60318 1980 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 CHD7Q9P2D1 2997 aa14.1□□□□□ -0.15
UPF3A-210ENST00000493727 PLIN4Q96Q06 1357 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 IGKV6D-41A0A0C4DH26 115 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 CCDC69A6NI79 296 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 AKR1A1P14550 325 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 EPHB4P54760 987 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 TLE2Q04725 743 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 BECN1Q14457 450 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 SNRNP48Q6IEG0 339 aaKnown RBP14.09□□□□□ -0.15
UPF3A-210ENST00000493727 RNF180Q86T96 592 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 GMCL1P1Q8NEA9 526 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 SNIP1Q8TAD8 396 aaKnown RBP14.09□□□□□ -0.15
UPF3A-210ENST00000493727 BRF1Q92994 677 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 DDX11Q96FC9 970 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 TTC14Q96N46 770 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 ARHGAP9Q9BRR9 750 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 PRDM6Q9NQX0 595 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 MTMR4Q9NYA4 1195 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 FBXO40Q9UH90 709 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 STX8Q9UNK0 236 aa14.09□□□□□ -0.15
UPF3A-210ENST00000493727 NMT2O60551 498 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 PGK2P07205 417 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 FOSL2P15408 326 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 OAZ1P54368 228 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 PTK2Q05397 1052 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 LAPTM4AQ15012 233 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 SYNE3Q6ZMZ3 975 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 CYP4X1Q8N118 509 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 ENAHQ8N8S7 591 aaPredicted RBP14.08□□□□□ -0.16
UPF3A-210ENST00000493727 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 NUP88Q99567 741 aaPredicted RBP14.08□□□□□ -0.16
UPF3A-210ENST00000493727 ALDH8A1Q9H2A2 487 aaPredicted RBP14.08□□□□□ -0.16
UPF3A-210ENST00000493727 KAT14Q9H8E8 782 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 XPNPEP3Q9NQH7 507 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 TCP11L1Q9NUJ3 509 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 SYNGAP1Q96PV0 1343 aa14.08□□□□□ -0.16
UPF3A-210ENST00000493727 KIAA0355O15063 1070 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 CLTBP09497 229 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 APOBRQ0VD83 1088 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
UPF3A-210ENST00000493727 CPXCR1Q8N123 301 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 TMTC2Q8N394 836 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 CHST13Q8NET6 341 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 FAM174AQ8TBP5 190 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 IGDCC4Q8TDY8 1250 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 SNX21Q969T3 373 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 LY9Q9HBG7 655 aa14.07□□□□□ -0.16
UPF3A-210ENST00000493727 XIRP2A4UGR9 3374 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 KLF18A0A0U1RQI7 1052 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 GOLGA8BA8MQT2 603 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 LIFRP42702 1097 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 MAMDC4Q6UXC1 1216 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 CATIPQ7Z7H3 387 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 FAM160B2Q86V87 743 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 DGKHQ86XP1 1220 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 USP38Q8NB14 1042 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 CHURC1Q8WUH1 139 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 KIFC2Q96AC6 838 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 RNPC3Q96LT9 517 aaKnown RBP14.06□□□□□ -0.16
UPF3A-210ENST00000493727 TSEN34Q9BSV6 310 aaKnown RBP14.06□□□□□ -0.16
UPF3A-210ENST00000493727 SLC38A10Q9HBR0 1119 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 GDPD2Q9HCC8 539 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 IL17RBQ9NRM6 502 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 LIMCH1Q9UPQ0 1083 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 SLC12A7Q9Y666 1083 aa14.06□□□□□ -0.16
UPF3A-210ENST00000493727 DNAJC25-GNG10A0A024R161 153 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 A0A1W2PQ45 241 aaPredicted RBP14.05□□□□□ -0.16
UPF3A-210ENST00000493727 A0A1W2PQY0 241 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 ADAMTS4O75173 837 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 PGK1P00558 417 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
UPF3A-210ENST00000493727 TOP1P11387 765 aaKnown RBP14.05□□□□□ -0.16
UPF3A-210ENST00000493727 BMP3P12645 472 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 TAL1P17542 331 aaPredicted RBP14.05□□□□□ -0.16
UPF3A-210ENST00000493727 STAT2P52630 851 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 SEC23AQ15436 765 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 SLFN13Q68D06 897 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 SGMS1Q86VZ5 419 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 MICU3Q86XE3 530 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 LRRC47Q8N1G4 583 aaKnown RBP14.05□□□□□ -0.16
UPF3A-210ENST00000493727 ANKRD35Q8N283 1001 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 FBXL16Q8N461 479 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 NUP133Q8WUM0 1156 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 GMCL1Q96IK5 515 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 ZSCAN31Q96LW9 406 aaPredicted RBP14.05□□□□□ -0.16
UPF3A-210ENST00000493727 AGXT2Q9BYV1 514 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 PRM3Q9NNZ6 103 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 FAM184BQ9ULE4 1060 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 MTMR7Q9Y216 660 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 REV3LO60673 3130 aa14.05□□□□□ -0.16
UPF3A-210ENST00000493727 TTC24A2A3L6 582 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms