RNA–Protein interactions for RNA: ENST00000493540.1

CAB39-206, Transcript of calcium binding protein 39, humanhuman

TSL 4

Gene CAB39, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-206ENST00000493540 BTNL9Q6UXG8 535 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 VASH1Q7L8A9 365 aaPredicted RBP8.33□□□□□ -1.08
CAB39-206ENST00000493540 RASGRP2Q7LDG7 609 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 TLK2Q86UE8 772 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 FAM160B2Q86V87 743 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 IFNL3Q8IZI9 196 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 RAVER2Q9HCJ3 691 aaKnown RBP8.33□□□□□ -1.08
CAB39-206ENST00000493540 IL23AQ9NPF7 189 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 IL17RBQ9NRM6 502 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 CYP39A1Q9NYL5 469 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 CXXC1Q9P0U4 656 aaPredicted RBP8.33□□□□□ -1.08
CAB39-206ENST00000493540 CLIP2Q9UDT6 1046 aa8.33□□□□□ -1.08
CAB39-206ENST00000493540 ZHX1Q9UKY1 873 aaPredicted RBP8.33□□□□□ -1.08
CAB39-206ENST00000493540 PATL2C9JE40 543 aaKnown RBP8.32□□□□□ -1.08
CAB39-206ENST00000493540 B4GALT4O60513 344 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 ZBED4O75132 1171 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 PRDM1O75626 825 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 CABYRO75952 493 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 BMP3P12645 472 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 PRR20EP86478 221 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 PRR20CP86479 221 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 PRR20DP86480 221 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 PRR20BP86481 221 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 PRR20AP86496 221 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 MUM1L1Q5H9M0 696 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 TSHZ3Q63HK5 1081 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 CCDC129Q6ZRS4 1044 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 ZNF365Q70YC5 407 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 TICAM2Q86XR7 235 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 LRRC47Q8N1G4 583 aaKnown RBP8.32□□□□□ -1.08
CAB39-206ENST00000493540 TMEM199Q8N511 208 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 SNIP1Q8TAD8 396 aaKnown RBP8.32□□□□□ -1.08
CAB39-206ENST00000493540 ATXN2LQ8WWM7 1075 aaKnown RBP8.32□□□□□ -1.08
CAB39-206ENST00000493540 DDX11Q96FC9 970 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 RANBP17Q9H2T7 1088 aaKnown RBP8.32□□□□□ -1.08
CAB39-206ENST00000493540 ZNF287Q9HBT7 754 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 VTA1Q9NP79 307 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 RNF146Q9NTX7 359 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 RCAN3Q9UKA8 241 aa8.32□□□□□ -1.08
CAB39-206ENST00000493540 YBX2Q9Y2T7 364 aaKnown RBP8.32□□□□□ -1.08
CAB39-206ENST00000493540 ASB14A6NK59 587 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 ICAM1P05362 532 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 PFKMP08237 780 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 SNHG28P0DPA3 235 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 SMPD1P17405 629 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 PTGS1P23219 599 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 PPARAQ07869 468 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 RBL2Q08999 1139 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 ALX1Q15699 326 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 RAB30Q15771 203 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 FSCN1Q16658 493 aaKnown RBP8.31□□□□□ -1.08
CAB39-206ENST00000493540 SLFN13Q68D06 897 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 CCDC174Q6PII3 467 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 TRIM67Q6ZTA4 783 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 CYP4X1Q8N118 509 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 CPXCR1Q8N123 301 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 STAG1Q8WVM7 1258 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 KIFC2Q96AC6 838 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 CTAGE1Q96RT6 745 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 KCTD15Q96SI1 283 aaPredicted RBP8.31□□□□□ -1.08
CAB39-206ENST00000493540 SEC62Q99442 399 aaKnown RBP8.31□□□□□ -1.08
CAB39-206ENST00000493540 MKNK2Q9HBH9 465 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 THEGQ9P2T0 379 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 PRR12Q9ULL5 1215 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 FNDC1Q4ZHG4 1894 aaPredicted RBP8.31□□□□□ -1.08
CAB39-206ENST00000493540 KMT2EQ8IZD2 1858 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 PLXNA4Q9HCM2 1894 aa8.31□□□□□ -1.08
CAB39-206ENST00000493540 MYH9P35579 1960 aaKnown RBP8.31□□□□□ -1.08
CAB39-206ENST00000493540 WDR19Q8NEZ3 1342 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 TTC24A2A3L6 582 aaPredicted RBP8.3□□□□□ -1.08
CAB39-206ENST00000493540 GRXCR1A8MXD5 290 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 TMEM232C9JQI7 657 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
CAB39-206ENST00000493540 CYP2C18P33260 490 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 TDO2P48775 406 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 PURAQ00577 322 aaKnown RBP8.3□□□□□ -1.08
CAB39-206ENST00000493540 BEX3Q00994 111 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 TNFAIP2Q03169 654 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 ITGA7Q13683 1181 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 DUSP28Q4G0W2 176 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 GNASQ5JWF2 1037 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 TMEM63BQ5T3F8 832 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 RNF20Q5VTR2 975 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 RCSD1Q6JBY9 416 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 CXCL17Q6UXB2 119 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 ANKRD35Q8N283 1001 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 OTUD7AQ8TE49 926 aaPredicted RBP8.3□□□□□ -1.08
CAB39-206ENST00000493540 CHURC1Q8WUH1 139 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 CLEC4DQ8WXI8 215 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 ASB2Q96Q27 587 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 MAF1Q9H063 256 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 ALDH8A1Q9H2A2 487 aaPredicted RBP8.3□□□□□ -1.08
CAB39-206ENST00000493540 HIPK3Q9H422 1215 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 PCDHA11Q9Y5I1 949 aa8.3□□□□□ -1.08
CAB39-206ENST00000493540 USP34Q70CQ2 3546 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 EVPLQ92817 2033 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 ESPNB1AK53 854 aa8.29□□□□□ -1.08
CAB39-206ENST00000493540 NMT2O60551 498 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms