RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 NLRX1Q86UT6 975 aa20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 CCDC12Q8WUD4 166 aaPredicted RBP20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 ZNF274Q96GC6 653 aaPredicted RBP20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 ZFP91Q96JP5 570 aaPredicted RBP20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 SPATA33Q96N06 139 aa20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 ALDH8A1Q9H2A2 487 aaPredicted RBP20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 MLXIPQ9HAP2 919 aa20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 RTEL1Q9NZ71 1219 aa20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 SCN10AQ9Y5Y9 1956 aa20.66■□□□□ 0.9
GTF3C2-212ENST00000493511 SMCO2A6NFE2 343 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 SPATA31C2B4DYI2 1134 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 FOSP01100 380 aaPredicted RBP20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 SUPT20HL2P0C7V6 817 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 IFNAR1P17181 557 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 ITGB8P26012 769 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 CCT2P78371 535 aaKnown RBP20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 NEDD9Q14511 834 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 NBPF20Q3BBV1 942 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 CDHR1Q96JP9 859 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 RNF26Q9BY78 433 aaPredicted RBP20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 PCDHA6Q9UN73 950 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 PCDHA8Q9Y5H6 950 aa20.65■□□□□ 0.9
GTF3C2-212ENST00000493511 CPLX1O14810 134 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 B4GALT4O60513 344 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 PPFIA4O75335 1185 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 SP2Q02086 613 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 FPGSQ05932 587 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 PTPN11Q06124 597 aaPredicted RBP20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 NTRK3Q16288 839 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 FAM47CQ5HY64 1035 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 PHKBQ93100 1093 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 KATNAL1Q9BW62 490 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 TRPV6Q9H1D0 765 aa20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 NCOA5Q9HCD5 579 aaKnown RBP20.64■□□□□ 0.89
GTF3C2-212ENST00000493511 MYH7BA7E2Y1 1941 aa20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 AP3B2Q13367 1082 aa20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 LRIT3Q3SXY7 679 aa20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 MFSD5Q6N075 450 aa20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 CPLX2Q6PUV4 134 aaKnown RBP20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 TRIM22Q8IYM9 498 aa20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 GIMAP8Q8ND71 665 aaPredicted RBP20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 GPRASP2Q96D09 838 aa20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 SENP7Q9BQF6 1050 aa20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 SLC26A6Q9BXS9 759 aa20.63■□□□□ 0.89
GTF3C2-212ENST00000493511 ESYT2A0FGR8 921 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 NOP56O00567 594 aaKnown RBP20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 HOXD8P13378 290 aaPredicted RBP20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 CHMP4BP1P59074 171 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 ANKRD1Q15327 319 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 PKN1Q16512 942 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 HSDL1Q3SXM5 330 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 MCTP2Q6DN12 878 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 METTL7BQ6UX53 244 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 TMEM199Q8N511 208 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 PPP1R12CQ9BZL4 782 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 HIPK3Q9H422 1215 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 C6orf50Q9HD87 102 aa20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 TRMT13Q9NUP7 481 aaKnown RBP20.62■□□□□ 0.89
GTF3C2-212ENST00000493511 MAFGO15525 162 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 SORBS3O60504 671 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 F2P00734 622 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 GNA11P29992 359 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 SEMA3FQ13275 785 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 CYFIP1Q7L576 1253 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 CCDC148Q8NFR7 591 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 KAT2BQ92831 832 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 IL17RAQ96F46 866 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 ANO3Q9BYT9 981 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 ZMYND12Q9H0C1 365 aa20.61■□□□□ 0.89
GTF3C2-212ENST00000493511 ITGB5P18084 799 aa20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 CLK2P49760 499 aaKnown RBP20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 SSRP1Q08945 709 aaKnown RBP20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 STK3Q13188 491 aa20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 PPIGQ13427 754 aaKnown RBP eCLIP20.6■□□□□ 0.891e-8■■■□□ 17.8
GTF3C2-212ENST00000493511 MTMR1Q13613 665 aa20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 BICD2Q8TD16 824 aa20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 LARP6Q9BRS8 491 aaKnown RBP20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 NOD1Q9Y239 953 aa20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 UBIAD1Q9Y5Z9 338 aa20.6■□□□□ 0.89
GTF3C2-212ENST00000493511 PPFIA3O75145 1194 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 CDKL5O76039 1030 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 SLC34A2O95436 690 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 ZNF286BP0CG31 522 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 SREBF1P36956 1147 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 PSEN2P49810 448 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 SESTD1Q86VW0 696 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 REXO1Q8N1G1 1221 aaKnown RBP20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 C7orf31Q8N865 590 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 NOC4LQ9BVI4 516 aaKnown RBP20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 SH3GLB2Q9NR46 395 aa20.59■□□□□ 0.89
GTF3C2-212ENST00000493511 SEC24BO95487 1268 aa20.58■□□□□ 0.89
GTF3C2-212ENST00000493511 CYP2C18P33260 490 aa20.58■□□□□ 0.89
GTF3C2-212ENST00000493511 MFSD10Q14728 455 aa20.58■□□□□ 0.89
GTF3C2-212ENST00000493511 SHHQ15465 462 aa20.58■□□□□ 0.89
GTF3C2-212ENST00000493511 KIAA0753Q2KHM9 967 aa20.58■□□□□ 0.89
GTF3C2-212ENST00000493511 SLKQ9H2G2 1235 aaPredicted RBP20.58■□□□□ 0.89
GTF3C2-212ENST00000493511 JADE2Q9NQC1 790 aa20.58■□□□□ 0.89
GTF3C2-212ENST00000493511 DEXIO95424 95 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 CYP2C9P11712 490 aa20.57■□□□□ 0.88
GTF3C2-212ENST00000493511 CSF2RAP15509 400 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms