RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 TAPT1Q6NXT6 567 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 DAGLBQ8NCG7 672 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 DPF3Q92784 378 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 GPRASP2Q96D09 838 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 PAWRQ96IZ0 340 aaKnown RBP9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 PGBD1Q96JS3 809 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 GLT1D1Q96MS3 346 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 SDF4Q9BRK5 362 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 TSEN34Q9BSV6 310 aaKnown RBP9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 SENP6Q9GZR1 1112 aaPredicted RBP9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 POLR3EQ9NVU0 708 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 TMEM260Q9NX78 707 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 KCNJ14Q9UNX9 436 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 DDX49Q9Y6V7 483 aaKnown RBP9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 FRMPD4Q14CM0 1322 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 SYNRGQ9UMZ2 1314 aa9.26□□□□□ -0.93
TM4SF1-204ENST00000493348 K7ELQ4 463 aaPredicted RBP9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 KPNA6O60684 536 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 CABYRO75952 493 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 GGPS1O95749 300 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 MYL3P08590 195 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 PDCP20941 246 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 GJB2P29033 226 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 SREBF1P36956 1147 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 CLK2P49760 499 aaKnown RBP9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 CHMP4BP1P59074 171 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 BECN1Q14457 450 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 DGKDQ16760 1214 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 CEP55Q53EZ4 464 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 KRT40Q6A162 431 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 MCTP1Q6DN14 999 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 IL31RAQ8NI17 732 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 RASGRP4Q8TDF6 673 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 TBCKQ8TEA7 893 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 LENG1Q96BZ8 264 aaPredicted RBP9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 ZFP91Q96JP5 570 aaPredicted RBP9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 SPATA33Q96N06 139 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 AIFM3Q96NN9 605 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 MXRA8Q9BRK3 442 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 PHF20Q9BVI0 1012 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 KATNBL1Q9H079 304 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 STARD7Q9NQZ5 370 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 PRKAG2Q9UGJ0 569 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 DDX41Q9UJV9 622 aaKnown RBP9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 DOCK5Q9H7D0 1870 aa9.25□□□□□ -0.93
TM4SF1-204ENST00000493348 SORBS3O60504 671 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 MMP1P03956 469 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 ASGR1P07306 291 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 USP11P51784 963 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 MRPS9P82933 396 aaKnown RBP9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 BEX3Q00994 111 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 GUCY1B3Q02153 619 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 SP4Q02446 784 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 KCNA10Q16322 511 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 LETM2Q2VYF4 491 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 LARP1BQ659C4 914 aaKnown RBP9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 PIK3AP1Q6ZUJ8 805 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 CYFIP1Q7L576 1253 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 PLA2G4DQ86XP0 818 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 DIS3L2Q8IYB7 885 aaKnown RBP9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 FERMT2Q96AC1 680 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 SHISA4Q96DD7 197 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 INPP4AQ96PE3 977 aaPredicted RBP9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 SENP7Q9BQF6 1050 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 KATNAL1Q9BW62 490 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 UPF3AQ9H1J1 476 aaKnown RBP9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 JADE2Q9NQC1 790 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 PKD2L1Q9P0L9 805 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 DAXXQ9UER7 740 aaPredicted RBP9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 NOL7Q9UMY1 257 aaKnown RBP9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 GNEQ9Y223 722 aaKnown RBP9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 NR2E3Q9Y5X4 410 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 MROH7Q68CQ1 1323 aa9.24□□□□□ -0.93
TM4SF1-204ENST00000493348 MYH9P35579 1960 aaKnown RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 A0A0U1RQG5 324 aaPredicted RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 A0A1W2PQ45 241 aaPredicted RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 A0A1W2PQY0 241 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 SPATA31C2B4DYI2 1134 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 TLR3O15455 904 aaKnown RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 EVI5O60447 810 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 CCNT1O60563 726 aaKnown RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 DTNBO60941 627 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 ADAMTS4O75173 837 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 BAG4O95429 457 aaKnown RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 CYP3A4P08684 503 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 FDPSP14324 419 aaKnown RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 UBA1P22314 1058 aaKnown RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 CST5P28325 142 aaPredicted RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 ICAM3P32942 547 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 ACLYP53396 1101 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 INF2Q27J81 1249 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 PRR16Q569H4 304 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 CELF3Q5SZQ8 465 aaKnown RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 NIPA1Q7RTP0 329 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 NEK8Q86SG6 692 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 PPTC7Q8NI37 304 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 DIS3LQ8TF46 1054 aaKnown RBP9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 COPS5Q92905 334 aa9.23□□□□□ -0.93
TM4SF1-204ENST00000493348 TNPO1Q92973 898 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms