RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 PSTPIP2Q9H939 334 aa13.24□□□□□ -0.29
LRTM1-202ENST00000493075 EPB41L2O43491 1005 aaKnown RBP13.23□□□□□ -0.29
LRTM1-202ENST00000493075 GGPS1O95749 300 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 F2P00734 622 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 UBA1P22314 1058 aaKnown RBP13.23□□□□□ -0.29
LRTM1-202ENST00000493075 PSEN2P49810 448 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 NEDD9Q14511 834 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 PTGISQ16647 500 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 ADCK5Q3MIX3 580 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 HSDL1Q3SXM5 330 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 MICU3Q86XE3 530 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 VWCEQ96DN2 955 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 CDX2Q99626 313 aaPredicted RBP13.23□□□□□ -0.29
LRTM1-202ENST00000493075 SENP7Q9BQF6 1050 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 TTYH1Q9H313 450 aaPredicted RBP13.23□□□□□ -0.29
LRTM1-202ENST00000493075 MLXIPQ9HAP2 919 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 GTF2IRD1Q9UHL9 959 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 NOD1Q9Y239 953 aa13.23□□□□□ -0.29
LRTM1-202ENST00000493075 ZBTB43O43298 467 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 FIBPO43427 364 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 IQCF3P0C7M6 154 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 DNAJB2P25686 324 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 HSPA4P34932 840 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 RBL2Q08999 1139 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 FUT2Q10981 343 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 MFSD10Q14728 455 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 GDF6Q6KF10 455 aaPredicted RBP13.22□□□□□ -0.29
LRTM1-202ENST00000493075 FBXL16Q8N461 479 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 CCDC82Q8N4S0 544 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 CCDC155Q8N6L0 562 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 C7orf31Q8N865 590 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 SCLYQ96I15 445 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 FAM161BQ96MY7 647 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 BRPF3Q9ULD4 1205 aa13.22□□□□□ -0.29
LRTM1-202ENST00000493075 MAFGO15525 162 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 REC8O95072 547 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 PARNO95453 639 aaKnown RBP13.21□□□□□ -0.29
LRTM1-202ENST00000493075 CHMP4BP1P59074 171 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 RAB30Q15771 203 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 RTN1Q16799 776 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 KIAA0753Q2KHM9 967 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 METTL7BQ6UX53 244 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 OTOP2Q7RTS6 562 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 NLRX1Q86UT6 975 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 RAB11FIP4Q86YS3 637 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 GIMAP8Q8ND71 665 aaPredicted RBP13.21□□□□□ -0.29
LRTM1-202ENST00000493075 SLC17A8Q8NDX2 589 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 AFAP1L1Q8TED9 768 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 GPKOWQ92917 476 aaPredicted RBP eCLIP13.21□□□□□ -0.29
LRTM1-202ENST00000493075 ZFP91Q96JP5 570 aaPredicted RBP13.21□□□□□ -0.29
LRTM1-202ENST00000493075 CTAGE1Q96RT6 745 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 C16orf70Q9BSU1 422 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 USP26Q9BXU7 913 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 RTEL1Q9NZ71 1219 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 CXXC1Q9P0U4 656 aaPredicted RBP13.21□□□□□ -0.29
LRTM1-202ENST00000493075 HDAC6Q9UBN7 1215 aa13.21□□□□□ -0.29
LRTM1-202ENST00000493075 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 hCG_1984214I3L0E3 225 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 ABCB7O75027 752 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 NEFLP07196 543 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 ACTN1P12814 892 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 SEMA3FQ13275 785 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 PTK7Q13308 1070 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 PPP1R18Q6NYC8 613 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 ZNF713Q8N859 430 aaPredicted RBP13.2□□□□□ -0.3
LRTM1-202ENST00000493075 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 TIFAQ96CG3 184 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 GPRASP2Q96D09 838 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 CDHR1Q96JP9 859 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 ALG1Q9BT22 464 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 PBX4Q9BYU1 374 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 ZNF576Q9H609 170 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 FAM217BQ9NTX9 383 aaPredicted RBP13.2□□□□□ -0.3
LRTM1-202ENST00000493075 MSRAQ9UJ68 235 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 SNX14Q9Y5W7 946 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 SLC4A7Q9Y6M7 1214 aa13.2□□□□□ -0.3
LRTM1-202ENST00000493075 V9GY48 417 aaPredicted RBP13.2□□□□□ -0.3
LRTM1-202ENST00000493075 SCN10AQ9Y5Y9 1956 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 KLF18A0A0U1RQI7 1052 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 hCG_1642624A0A1W2PR95 340 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 SPDYE3A6NKU9 549 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 GRXCR1A8MXD5 290 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 H3BRB1 525 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 NOP56O00567 594 aaKnown RBP13.19□□□□□ -0.3
LRTM1-202ENST00000493075 ZNF286BP0CG31 522 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 SELPP16109 830 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 PSMA5P28066 241 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 ERICH6BQ5W0A0 696 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 CYFIP1Q7L576 1253 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 HEATR3Q7Z4Q2 680 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 PHOSPHO2Q8TCD6 241 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 GPR20Q99678 358 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 GLT8D2Q9H1C3 349 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 TUT1Q9H6E5 874 aaKnown RBP13.19□□□□□ -0.3
LRTM1-202ENST00000493075 BCAS3Q9H6U6 928 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 RIC8AQ9NPQ8 531 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 PCDHA6Q9UN73 950 aa13.19□□□□□ -0.3
LRTM1-202ENST00000493075 PCDHA8Q9Y5H6 950 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms