RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KCTD17Q8N5Z5 321 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 ZKSCAN4Q969J2 545 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 C12orf42Q96LP6 360 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 RPAP3Q9H6T3 665 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 NRDCO43847 1150 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 ZBED4O75132 1171 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 SKILP12757 684 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 SFPQP23246 707 aaKnown RBP eCLIP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 PSMD2Q13200 908 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 ARID5BQ14865 1188 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 FILIP1LQ4L180 1135 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 PRAMEF18Q5VWM3 479 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 APTXQ7Z2E3 356 aaKnown RBP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 KCNK18Q7Z418 384 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 ANKRD20A12PQ8NF67 263 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 NOC3LQ8WTT2 800 aaKnown RBP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 CLEC4DQ8WXI8 215 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 SYT17Q9BSW7 474 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 ADARB2Q9NS39 739 aaKnown RBP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 BMP2KQ9NSY1 1161 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 LIMA1Q9UHB6 759 aaKnown RBP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 KIAA1024Q9UPX6 916 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 MAPK8IP1Q9UQF2 711 aa15.7■□□□□ 0.1
PTPN7-216ENST00000492977 CTDP1Q9Y5B0 961 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-216ENST00000492977 BICDL2A1A5D9 508 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 DDNO94850 711 aaPredicted RBP15.69■□□□□ 0.1
PTPN7-216ENST00000492977 RPA1P27694 616 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 CCZ1BP86790 482 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 CCZ1P86791 482 aaPredicted RBP15.69■□□□□ 0.1
PTPN7-216ENST00000492977 CEP55Q53EZ4 464 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 SPECC1LQ69YQ0 1117 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 CYP2W1Q8TAV3 490 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 DDX12PQ92771 950 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 RNF181Q9P0P0 153 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 ADD3Q9UEY8 706 aaKnown RBP15.69■□□□□ 0.1
PTPN7-216ENST00000492977 VAV3Q9UKW4 847 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 ZHX2Q9Y6X8 837 aa15.69■□□□□ 0.1
PTPN7-216ENST00000492977 CCNE1P24864 410 aa15.68■□□□□ 0.1
PTPN7-216ENST00000492977 STAT3P40763 770 aa15.68■□□□□ 0.1
PTPN7-216ENST00000492977 SETQ01105 290 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-216ENST00000492977 STK4Q13043 487 aa15.68■□□□□ 0.1
PTPN7-216ENST00000492977 TBX2Q13207 712 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-216ENST00000492977 NCAPH2Q6IBW4 605 aa15.68■□□□□ 0.1
PTPN7-216ENST00000492977 POLR3CQ9BUI4 534 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-216ENST00000492977 THAP9Q9H5L6 903 aa15.68■□□□□ 0.1
PTPN7-216ENST00000492977 RYDENQ9NUL5 291 aaKnown RBP15.68■□□□□ 0.1
PTPN7-216ENST00000492977 POLR2AP24928 1970 aaKnown RBP15.68■□□□□ 0.1
PTPN7-216ENST00000492977 RPTORQ8N122 1335 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 POTEB3A0JP26 581 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 POTECB2RU33 542 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 MEIS1O00470 390 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 VWA5AO00534 786 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 MED24O75448 989 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 PLA2G4BP0C869 781 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 ALAS1P13196 640 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 EHHADHQ08426 723 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 DGKZQ13574 1117 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 TCP11X2Q5H9J9 407 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 TTI2Q6NXR4 508 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 POTEBQ6S5H4 581 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 DYMQ7RTS9 669 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 KRT26Q7Z3Y9 468 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 CATSPER3Q86XQ3 398 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 CPXCR1Q8N123 301 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 C17orf53Q8N3J3 647 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-216ENST00000492977 SLC5A5Q92911 643 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 P2RX5Q93086 422 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 DNAJC19Q96DA6 116 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 UIMC1Q96RL1 719 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 RAVER2Q9HCJ3 691 aaKnown RBP15.67■□□□□ 0.1
PTPN7-216ENST00000492977 PHIPQ8WWQ0 1821 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 SSC5DA1L4H1 1573 aa15.67■□□□□ 0.1
PTPN7-216ENST00000492977 KCNJ18B7U540 433 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 E9PMD0 336 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 NFIBO00712 420 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 PSMD10O75832 226 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 SPATA31C1P0DKV0 1188 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 FCER1AP12319 257 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 PPP2R5CQ13362 524 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 KCNJ12Q14500 433 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 KRT31Q15323 416 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 OTOP1Q7RTM1 612 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 NIPA1Q7RTP0 329 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 CCDC112Q8NEF3 446 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.66■□□□□ 0.1
PTPN7-216ENST00000492977 DCPSQ96C86 337 aaKnown RBP15.66■□□□□ 0.1
PTPN7-216ENST00000492977 KCND1Q9NSA2 647 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 DNM3Q9UQ16 869 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 PARP14Q460N5 1801 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 COBLO75128 1261 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 USP2O75604 605 aaPredicted RBP15.66■□□□□ 0.1
PTPN7-216ENST00000492977 BCRP11274 1271 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 IDEP14735 1019 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 EEF1GP26641 437 aaKnown RBP15.66■□□□□ 0.1
PTPN7-216ENST00000492977 KCNJ6P48051 423 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 PMS1P54277 932 aaKnown RBP15.66■□□□□ 0.1
PTPN7-216ENST00000492977 OAZ1P54368 228 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 LRCH2Q5VUJ6 765 aa15.66■□□□□ 0.1
PTPN7-216ENST00000492977 GUF1Q8N442 669 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms