RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 NKX2-4Q9H2Z4 354 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 LY9Q9HBG7 655 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 SENP2Q9HC62 589 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 HDAC6Q9UBN7 1215 aa14.38□□□□□ -0.11
COL6A1-205ENST00000492851 RGS20O76081 388 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 ICAM3P32942 547 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 KCNJ6P48051 423 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 NECTIN1Q15223 517 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 LRRC8DQ7L1W4 858 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 VWCEQ96DN2 955 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 ESYT1Q9BSJ8 1104 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 ALG1Q9BT22 464 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 LSG1Q9H089 658 aaKnown RBP14.37□□□□□ -0.11
COL6A1-205ENST00000492851 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
COL6A1-205ENST00000492851 PRDM12Q9H4Q4 367 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 SLC12A7Q9Y666 1083 aa14.37□□□□□ -0.11
COL6A1-205ENST00000492851 SPATA31C2B4DYI2 1134 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 NOP56O00567 594 aaKnown RBP14.36□□□□□ -0.11
COL6A1-205ENST00000492851 SLC27A2O14975 620 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 FIBPO43427 364 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 GNAT1P11488 350 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 UBA1P22314 1058 aaKnown RBP14.36□□□□□ -0.11
COL6A1-205ENST00000492851 SLC35G1Q2M3R5 365 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 HSDL1Q3SXM5 330 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 BMP2KLQ5H9B9 411 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 CENPQQ7L2Z9 268 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-205ENST00000492851 NLRX1Q86UT6 975 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 CDHR1Q96JP9 859 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 INPP4AQ96PE3 977 aaPredicted RBP14.36□□□□□ -0.11
COL6A1-205ENST00000492851 SENP7Q9BQF6 1050 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 ANO2Q9NQ90 1003 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 YBX2Q9Y2T7 364 aaKnown RBP14.36□□□□□ -0.11
COL6A1-205ENST00000492851 TAF6LQ9Y6J9 622 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 SCN10AQ9Y5Y9 1956 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 FRMPD4Q14CM0 1322 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 EMSYQ7Z589 1322 aa14.36□□□□□ -0.11
COL6A1-205ENST00000492851 ABHD14A-ACY1A0A1B0GW23 586 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 H3BRB1 525 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 SH2B2O14492 632 aaPredicted RBP14.35□□□□□ -0.11
COL6A1-205ENST00000492851 CXCL10P02778 98 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 CKBP12277 381 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 IGFBP4P22692 258 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 RABGGTBP53611 331 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 SP2Q02086 613 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 PCNX4Q63HM2 1172 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 CREB3L3Q68CJ9 461 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 CNKSR3Q6P9H4 555 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 METTL7BQ6UX53 244 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 HERC6Q8IVU3 1022 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 ATXN2LQ8WWM7 1075 aaKnown RBP14.35□□□□□ -0.11
COL6A1-205ENST00000492851 TUT1Q9H6E5 874 aaKnown RBP14.35□□□□□ -0.11
COL6A1-205ENST00000492851 PSTPIP2Q9H939 334 aa14.35□□□□□ -0.11
COL6A1-205ENST00000492851 A0A0C4DFX4 3053 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 MAFGO15525 162 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 CAND2O75155 1236 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 ZNF286BP0CG31 522 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 MRPS9P82933 396 aaKnown RBP14.34□□□□□ -0.11
COL6A1-205ENST00000492851 IKBKEQ14164 716 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 TJAP1Q5JTD0 557 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 SGMS1Q86VZ5 419 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 FANCBQ8NB91 859 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 IL31RAQ8NI17 732 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 PPP1R13LQ8WUF5 828 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 PIBF1Q8WXW3 757 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 CTAGE1Q96RT6 745 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 C16orf70Q9BSU1 422 aa14.34□□□□□ -0.11
COL6A1-205ENST00000492851 ZNF215Q9UL58 517 aaPredicted RBP14.34□□□□□ -0.11
COL6A1-205ENST00000492851 C17orf102A2RUQ5 167 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 MEIS2O14770 477 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 GTPBP6O43824 516 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-205ENST00000492851 CA3P07451 260 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 POU3F3P20264 500 aaPredicted RBP14.33□□□□□ -0.12
COL6A1-205ENST00000492851 KRT32Q14532 448 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 SRBD1Q8N5C6 995 aaKnown RBP14.33□□□□□ -0.12
COL6A1-205ENST00000492851 ATP6V0A1Q93050 837 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 NEK1Q96PY6 1258 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 ZBED2Q9BTP6 218 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 MYL10Q9BUA6 226 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 EHMT1Q9H9B1 1298 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 RBM28Q9NW13 759 aaKnown RBP14.33□□□□□ -0.12
COL6A1-205ENST00000492851 RTEL1Q9NZ71 1219 aa14.33□□□□□ -0.12
COL6A1-205ENST00000492851 SPDYE3A6NKU9 549 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 TLL1O43897 1013 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 LGALS2P05162 132 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 HMGB1P09429 215 aaKnown RBP14.32□□□□□ -0.12
COL6A1-205ENST00000492851 MYOGP15173 224 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 ADGRE1Q14246 886 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 TSGA10IPQ3SY00 556 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 USP17L6PQ6QN14 398 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 CYFIP1Q7L576 1253 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 SERINC5Q86VE9 423 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 PPM1EQ8WY54 764 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 DHX38Q92620 1227 aaKnown RBP14.32□□□□□ -0.12
COL6A1-205ENST00000492851 GPRASP2Q96D09 838 aa14.32□□□□□ -0.12
COL6A1-205ENST00000492851 KIAA1217Q5T5P2 1943 aa14.31□□□□□ -0.12
COL6A1-205ENST00000492851 RSPH10B2B2RC85 870 aa14.31□□□□□ -0.12
COL6A1-205ENST00000492851 NBNO60934 754 aa14.31□□□□□ -0.12
COL6A1-205ENST00000492851 LGR5O75473 907 aa14.31□□□□□ -0.12
COL6A1-205ENST00000492851 RSPH10BP0C881 870 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms