RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 FHOD1Q9Y613 1164 aa3.91□□□□□ -1.78
SNX13-209ENST00000492626 ZEB2O60315 1214 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 SAFB2Q14151 953 aaKnown RBP eCLIP3.9□□□□□ -1.78
SNX13-209ENST00000492626 NKG7Q16617 165 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 IGF2-ASQ6U949 168 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 PPFIBP1Q86W92 1011 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 FIBCD1Q8N539 461 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 STAG1Q8WVM7 1258 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 SUGCTQ9HAC7 445 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 WASHC2AQ641Q2 1341 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 ADAMTSL1Q8N6G6 1762 aa3.9□□□□□ -1.78
SNX13-209ENST00000492626 MEGF11A6BM72 1044 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 HMGB1P1B2RPK0 211 aaPredicted RBP3.9□□□□□ -1.79
SNX13-209ENST00000492626 MEFVO15553 781 aaPredicted RBP3.9□□□□□ -1.79
SNX13-209ENST00000492626 APBA3O96018 575 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 ST5P78524 1137 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 FBXO11Q86XK2 927 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 ZNF526Q8TF50 670 aaPredicted RBP3.9□□□□□ -1.79
SNX13-209ENST00000492626 FBRSQ9HAH7 460 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 ZNF652Q9Y2D9 606 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 ZNF451Q9Y4E5 1061 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 LAMB1P07942 1786 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 GNAT3A8MTJ3 354 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 KATNA1O75449 491 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 DHCR24Q15392 516 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 C8orf86Q6ZUL3 223 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 CHAMP1Q96JM3 812 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 TNPO3Q9Y5L0 923 aaKnown RBP3.9□□□□□ -1.79
SNX13-209ENST00000492626 MRFAP1Q9Y605 127 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 TIAM2Q8IVF5 1701 aa3.9□□□□□ -1.79
SNX13-209ENST00000492626 SNUPNO95149 360 aaKnown RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 MYL1P05976 194 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 CD3EP07766 207 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 DRD2P14416 443 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 NEK2P51955 445 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 TBX4P57082 545 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 HABP4Q5JVS0 413 aaKnown RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 PAOXQ6QHF9 649 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 PPIL6Q8IXY8 311 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 EXOC8Q8IYI6 725 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 NACC1Q96RE7 527 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 TMPRSS13Q9BYE2 586 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 ARFGEF2Q9Y6D5 1785 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 FAM155AB1AL88 458 aaPredicted RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 ADAM11O75078 769 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 MAP4K4O95819 1239 aaPredicted RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 GSNP06396 782 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 SLC15A2Q16348 729 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 SFRP5Q5T4F7 317 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 PIK3R6Q5UE93 754 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 CDCA2Q69YH5 1023 aaPredicted RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 SLC4A10Q6U841 1118 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 RNF180Q86T96 592 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 ARHGEF39Q8N4T4 335 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 NAT16Q8N8M0 369 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 SYTL5Q8TDW5 730 aaPredicted RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 OSBP2Q969R2 916 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 PRR13Q9NZ81 148 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 GPR55Q9Y2T6 319 aaPredicted RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 EMC9Q9Y3B6 208 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 PCDHGC5Q9Y5F6 944 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 TRBV23OR9-2A0A075B6M9 112 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 MEIS1O00470 390 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 HSPA8P11142 646 aaKnown RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 SELPP16109 830 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 SDSP20132 328 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 RING1Q06587 406 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 SLBPQ14493 270 aaKnown RBP eCLIP3.89□□□□□ -1.79
SNX13-209ENST00000492626 STAT4Q14765 748 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 IFNL3Q8IZI9 196 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 FMR1NBQ8N0W7 255 aaPredicted RBP3.89□□□□□ -1.79
SNX13-209ENST00000492626 MYO1HQ8N1T3 1032 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 ACDQ96AP0 544 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 HHIPL1Q96JK4 782 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 SLC52A2Q9HAB3 445 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 GFOD1Q9NXC2 390 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 SAGE1Q9NXZ1 904 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 RIPOR2Q9Y4F9 1068 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 CPDO75976 1380 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 CCNB3Q8WWL7 1395 aa3.89□□□□□ -1.79
SNX13-209ENST00000492626 CBFA2T2O43439 604 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 TSPAN6O43657 245 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 ENDOUP21128 410 aaKnown RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 KCNAB2Q13303 367 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 PKN3Q6P5Z2 889 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 HDGFL2Q7Z4V5 671 aaPredicted RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 PNMA8AQ86V59 439 aaPredicted RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 CHMP4CQ96CF2 233 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 LUC7LQ9NQ29 371 aaKnown RBP3.88□□□□□ -1.79
SNX13-209ENST00000492626 CYP26B1Q9NR63 512 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 KCNK4Q9NYG8 393 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 SAMD15Q9P1V8 674 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 GTF2IRD1Q9UHL9 959 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 RCAN3Q9UKA8 241 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 A0A0A0MRY4 1105 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 ULK1O75385 1050 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 ZNF445P59923 1031 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 AFAP1L2Q8N4X5 818 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 MDFIQ99750 246 aa3.88□□□□□ -1.79
SNX13-209ENST00000492626 ZFYVE21Q9BQ24 234 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms