RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 APBA2Q99767 749 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 DNMT3LQ9UJW3 386 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 LRBAP50851 2863 aa5.3□□□□□ -1.56
UBR4-215ENST00000492606 FLNCQ14315 2725 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 CDK5RAP2Q96SN8 1893 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 PNMA6FA0A0J9YX94 578 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 A0A1W2PNR3 127 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 TTLL8A6PVC2 850 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 EIF1AYO14602 144 aaKnown RBP5.29□□□□□ -1.56
UBR4-215ENST00000492606 TBX10O75333 385 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 CTSHP09668 335 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 RRP1BQ14684 758 aaKnown RBP5.29□□□□□ -1.56
UBR4-215ENST00000492606 HERC6Q8IVU3 1022 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 ZNF843Q8N446 348 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 MAP4K1Q92918 833 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 ZFP42Q96MM3 310 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 CRISPLD1Q9H336 500 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 MORF4L1Q9UBU8 362 aa5.29□□□□□ -1.56
UBR4-215ENST00000492606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.29□□□□□ -1.56
UBR4-215ENST00000492606 SCN5AQ14524 2016 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 A0A1B0GTH6 734 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 FAM187AA6NFU0 413 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 SP9P0CG40 484 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 AOC1P19801 751 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 GCLCP48506 637 aaPredicted RBP5.28□□□□□ -1.56
UBR4-215ENST00000492606 CDK7P50613 346 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 RBM5P52756 815 aaKnown RBP eCLIP5.28□□□□□ -1.56
UBR4-215ENST00000492606 CCL23P55773 120 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 ERVK-21P61565 698 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 TYRO3Q06418 890 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 SF3B3Q15393 1217 aaKnown RBP5.28□□□□□ -1.56
UBR4-215ENST00000492606 COLEC12Q5KU26 742 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 SULT6B1Q6IMI4 303 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 LRRC69Q6ZNQ3 347 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 METTL16Q86W50 562 aaKnown RBP5.28□□□□□ -1.56
UBR4-215ENST00000492606 IL17REQ8NFR9 667 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 MRPL38Q96DV4 380 aaKnown RBP5.28□□□□□ -1.56
UBR4-215ENST00000492606 RPGRIP1Q96KN7 1286 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 ZCCHC2Q9C0B9 1178 aaKnown RBP5.28□□□□□ -1.56
UBR4-215ENST00000492606 WNT8AQ9H1J5 351 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 PORCNQ9H237 461 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 CHRDQ9H2X0 955 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 TXNRD2Q9NNW7 524 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 TIMMDC1Q9NPL8 285 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 SEC31BQ9NQW1 1179 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 TMEM63CQ9P1W3 806 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 ZNF112Q9UJU3 913 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 FOXD3Q9UJU5 478 aaPredicted RBP5.28□□□□□ -1.56
UBR4-215ENST00000492606 ZHX2Q9Y6X8 837 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 MED23Q9ULK4 1368 aa5.28□□□□□ -1.56
UBR4-215ENST00000492606 LRRK2Q5S007 2527 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 LOC105371045A0A1W2PR82 267 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 TM4SF5O14894 197 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 LINC01565O15544 149 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 TNFRSF21O75509 655 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 UPP2O95045 317 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 ARSDP51689 593 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 CACNB3P54284 484 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 HDLBPQ00341 1268 aaKnown RBP5.27□□□□□ -1.57
UBR4-215ENST00000492606 RAD51AP2Q09MP3 1159 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 MTHFSDQ2M296 383 aaKnown RBP5.27□□□□□ -1.57
UBR4-215ENST00000492606 TSNAXIP1Q2TAA8 658 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 PRAMEF19Q5SWL8 479 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 NOL9Q5SY16 702 aaKnown RBP5.27□□□□□ -1.57
UBR4-215ENST00000492606 PI16Q6UXB8 463 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 GPR142Q7Z601 462 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 TMCO2Q7Z6W1 182 aaPredicted RBP5.27□□□□□ -1.57
UBR4-215ENST00000492606 KREMEN2Q8NCW0 462 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 FLCNQ8NFG4 579 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 TDRD7Q8NHU6 1098 aaKnown RBP5.27□□□□□ -1.57
UBR4-215ENST00000492606 NPLOC4Q8TAT6 608 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 EDC3Q96F86 508 aaKnown RBP5.27□□□□□ -1.57
UBR4-215ENST00000492606 ZNF341Q9BYN7 854 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 RXFP3Q9NSD7 469 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 CD207Q9UJ71 328 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 AGTPBP1Q9UPW5 1226 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 AFG3L2Q9Y4W6 797 aa5.27□□□□□ -1.57
UBR4-215ENST00000492606 MAST3O60307 1309 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 XDHP47989 1333 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 COL11A1P12107 1806 aaPredicted RBP5.26□□□□□ -1.57
UBR4-215ENST00000492606 SEPT4O43236 478 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 DGAT1O75907 488 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 EYA4O95677 639 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 PGK1P00558 417 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 CAPNS1P04632 268 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 SNRPA1P09661 255 aaKnown RBP5.26□□□□□ -1.57
UBR4-215ENST00000492606 KLRK1P26718 216 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 GTF2F1P35269 517 aaKnown RBP eCLIP5.26□□□□□ -1.57
UBR4-215ENST00000492606 RRP1P56182 461 aaKnown RBP5.26□□□□□ -1.57
UBR4-215ENST00000492606 HIF1AQ16665 826 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 C8orf34Q49A92 452 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 ZC3H14Q6PJT7 736 aaKnown RBP5.26□□□□□ -1.57
UBR4-215ENST00000492606 KIF6Q6ZMV9 814 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 NLRP10Q86W26 655 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 SCLYQ96I15 445 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 LRIG1Q96JA1 1093 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 MSLNLQ96KJ4 702 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 SLC9A7Q96T83 725 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 OSBPL7Q9BZF2 842 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 COA1Q9GZY4 146 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms