RNA–Protein interactions for RNA: ENST00000492571.1

TNFRSF9-203, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-203ENST00000492571 KCNA5P22460 613 aa11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 WDR5P61964 334 aaKnown RBP11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 PTPROQ16827 1216 aa11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 LRRC8DQ7L1W4 858 aa11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 ALYREFQ86V81 257 aaKnown RBP11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 GDPD5Q8WTR4 605 aa11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 UBE2ZQ9H832 354 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 SUGCTQ9HAC7 445 aa11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 INSL6Q9Y581 213 aa11.45□□□□□ -0.58
TNFRSF9-203ENST00000492571 NMT2O60551 498 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 LPXNO60711 386 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 GJB5O95377 273 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 GH1P01241 217 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 ERVK-21P61565 698 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 DGKDQ16760 1214 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 LEXMQ3ZCV2 418 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 BTNL9Q6UXG8 535 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 KATNAL1Q9BW62 490 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 IRX2Q9BZI1 471 aaPredicted RBP11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 IL17RBQ9NRM6 502 aa11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 PRRC2BQ5JSZ5 2229 aaKnown RBP11.44□□□□□ -0.58
TNFRSF9-203ENST00000492571 TCF20Q9UGU0 1960 aaKnown RBP11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 FRMPD2Q68DX3 1309 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 TTC41PQ6P2S7 1318 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 LCHNA4D1U4 455 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 ARHGEF15O94989 841 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 CTDSPL2Q05D32 466 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 STXBP2Q15833 593 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 RRP12Q5JTH9 1297 aaKnown RBP11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 TSHZ3Q63HK5 1081 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 TTBK2Q6IQ55 1244 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 PTCRAQ6ISU1 281 aaPredicted RBP11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 SLC30A10Q6XR72 485 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 CHST3Q7LGC8 479 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 SESTD1Q86VW0 696 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 PPP1R13LQ8WUF5 828 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 AFG1LQ8WV93 481 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 COPS5Q92905 334 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 SEC62Q99442 399 aaKnown RBP11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 MAF1Q9H063 256 aa11.43□□□□□ -0.58
TNFRSF9-203ENST00000492571 RNF40O75150 1001 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 AMHP03971 560 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 CKBP12277 381 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 EDNRBP24530 442 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 ZMYM1Q5SVZ6 1142 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 SWT1Q5T5J6 900 aaKnown RBP11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 GDF6Q6KF10 455 aaPredicted RBP11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 FAM117BQ6P1L5 589 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 EP400NLQ6ZTU2 488 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 SEPT14Q6ZU15 432 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 MCF2L2Q86YR7 1114 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 DHX37Q8IY37 1157 aaKnown RBP11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 RGS22Q8NE09 1264 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 NSUN6Q8TEA1 469 aaKnown RBP11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 CLEC4DQ8WXI8 215 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 TTC14Q96N46 770 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 SAMD11Q96NU1 681 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 UPF3BQ9BZI7 483 aaKnown RBP11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 KCNH6Q9H252 994 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 DCTPP1Q9H773 170 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 C11orf16Q9NQ32 467 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 ANAPC4Q9UJX5 808 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 TRANK1O15050 2925 aa11.42□□□□□ -0.58
TNFRSF9-203ENST00000492571 MCM3APO60318 1980 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 EMSYQ7Z589 1322 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 WDR19Q8NEZ3 1342 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 GREB1LQ9C091 1923 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 LINC01553A4QN01 128 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 ORC4O43929 436 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 CXCL10P02778 98 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 MMP3P08254 477 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 DEFB103AP81534 67 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 PTK7Q13308 1070 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 LAMC2Q13753 1193 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 GPATCH4Q5T3I0 446 aaKnown RBP11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 TMCO2Q7Z6W1 182 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 IWS1Q96ST2 819 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 MTRQ99707 1265 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 TMEM47Q9BQJ4 181 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 CD320Q9NPF0 282 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 INCENPQ9NQS7 918 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 GTF2IRD1Q9UHL9 959 aa11.41□□□□□ -0.58
TNFRSF9-203ENST00000492571 DCXO43602 365 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 NCK2O43639 380 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 LGR5O75473 907 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 PDHBP11177 359 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 NOVP48745 357 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 MRE11P49959 708 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 RBL2Q08999 1139 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 LY6KQ17RY6 165 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 USH1GQ495M9 461 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 TIGD5Q53EQ6 642 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 ARHGEF16Q5VV41 709 aa11.4□□□□□ -0.58
TNFRSF9-203ENST00000492571 MYOCDQ8IZQ8 938 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms