RNA–Protein interactions for RNA: ENST00000492496.1

PKP4-214, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-214ENST00000492496 SMCO2A6NFE2 343 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 SPATA31C2B4DYI2 1134 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 FIBPO43427 364 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 FOSP01100 380 aaPredicted RBP18.29■□□□□ 0.52
PKP4-214ENST00000492496 ATXN8OSP0DMR3 200 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 CCT2P78371 535 aaKnown RBP18.29■□□□□ 0.52
PKP4-214ENST00000492496 AKAP17AQ02040 695 aaKnown RBP18.29■□□□□ 0.52
PKP4-214ENST00000492496 DGKDQ16760 1214 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 MYSM1Q5VVJ2 828 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 NFRKBQ6P4R8 1299 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 NLRX1Q86UT6 975 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 TDHQ8IZJ6 230 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 BADQ92934 168 aa18.29■□□□□ 0.52
PKP4-214ENST00000492496 ZFP91Q96JP5 570 aaPredicted RBP18.29■□□□□ 0.52
PKP4-214ENST00000492496 DNAH12Q6ZR08 3092 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 ESYT2A0FGR8 921 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 GGPS1O95749 300 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 TIMP1P01033 207 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 UBA1P22314 1058 aaKnown RBP18.28■□□□□ 0.52
PKP4-214ENST00000492496 FXR1P51114 621 aaKnown RBP eCLIP18.28■□□□□ 0.52
PKP4-214ENST00000492496 SP2Q02086 613 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 PTPN11Q06124 597 aaPredicted RBP18.28■□□□□ 0.52
PKP4-214ENST00000492496 PKN1Q16512 942 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 CCDC12Q8WUD4 166 aaPredicted RBP18.28■□□□□ 0.52
PKP4-214ENST00000492496 RTEL1Q9NZ71 1219 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 PCDH10Q9P2E7 1040 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 TRIOBPQ9H2D6 2365 aa18.28■□□□□ 0.52
PKP4-214ENST00000492496 B4GALT4O60513 344 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 HOXD8P13378 290 aaPredicted RBP18.27■□□□□ 0.52
PKP4-214ENST00000492496 ITGB8P26012 769 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 CLK2P49760 499 aaKnown RBP18.27■□□□□ 0.52
PKP4-214ENST00000492496 SEMA3FQ13275 785 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 AP3B2Q13367 1082 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 NEDD9Q14511 834 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 ANKRD1Q15327 319 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 NBPF20Q3BBV1 942 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 MCTP2Q6DN12 878 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 PHKBQ93100 1093 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 GPRASP2Q96D09 838 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 CDHR1Q96JP9 859 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 SENP7Q9BQF6 1050 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 ZMYND12Q9H0C1 365 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 MLXIPQ9HAP2 919 aa18.27■□□□□ 0.52
PKP4-214ENST00000492496 NCOA5Q9HCD5 579 aaKnown RBP18.27■□□□□ 0.52
PKP4-214ENST00000492496 PPFIA4O75335 1185 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 SEC24BO95487 1268 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 SUPT20HL2P0C7V6 817 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 HSDL1Q3SXM5 330 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 CPLX2Q6PUV4 134 aaKnown RBP18.26■□□□□ 0.51
PKP4-214ENST00000492496 TRIM22Q8IYM9 498 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 GIMAP8Q8ND71 665 aaPredicted RBP18.26■□□□□ 0.51
PKP4-214ENST00000492496 SPATA33Q96N06 139 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 KATNAL1Q9BW62 490 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 SLC26A6Q9BXS9 759 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 UBIAD1Q9Y5Z9 338 aa18.26■□□□□ 0.51
PKP4-214ENST00000492496 CPLX1O14810 134 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 MAFGO15525 162 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 GNA11P29992 359 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 FPGSQ05932 587 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 SSRP1Q08945 709 aaKnown RBP18.25■□□□□ 0.51
PKP4-214ENST00000492496 LRIT3Q3SXY7 679 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 MFSD5Q6N075 450 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 METTL7BQ6UX53 244 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 SESTD1Q86VW0 696 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 CCDC148Q8NFR7 591 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 KAT2BQ92831 832 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 LARP6Q9BRS8 491 aaKnown RBP18.25■□□□□ 0.51
PKP4-214ENST00000492496 TRPV6Q9H1D0 765 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 C6orf50Q9HD87 102 aa18.25■□□□□ 0.51
PKP4-214ENST00000492496 F2P00734 622 aa18.24■□□□□ 0.51
PKP4-214ENST00000492496 ITGB5P18084 799 aa18.24■□□□□ 0.51
PKP4-214ENST00000492496 FAM47CQ5HY64 1035 aa18.24■□□□□ 0.51
PKP4-214ENST00000492496 ANO3Q9BYT9 981 aa18.24■□□□□ 0.51
PKP4-214ENST00000492496 HIPK3Q9H422 1215 aa18.24■□□□□ 0.51
PKP4-214ENST00000492496 JADE2Q9NQC1 790 aa18.24■□□□□ 0.51
PKP4-214ENST00000492496 SH3GLB2Q9NR46 395 aa18.24■□□□□ 0.51
PKP4-214ENST00000492496 HAS3O00219 553 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 SREBF1P36956 1147 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 PSEN2P49810 448 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 STK3Q13188 491 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 MTMR1Q13613 665 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 CYFIP1Q7L576 1253 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 TMEM199Q8N511 208 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 BICD2Q8TD16 824 aa18.23■□□□□ 0.51
PKP4-214ENST00000492496 SLKQ9H2G2 1235 aaPredicted RBP18.23■□□□□ 0.51
PKP4-214ENST00000492496 NOP56O00567 594 aaKnown RBP18.22■□□□□ 0.51
PKP4-214ENST00000492496 SORBS3O60504 671 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 PFKFB2O60825 505 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 CDKL5O76039 1030 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 DEXIO95424 95 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 ZNF286BP0CG31 522 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 KCNA2P16389 499 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 AK2P54819 239 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 PPIGQ13427 754 aaKnown RBP eCLIP18.22■□□□□ 0.513e-11■■□□□ 12.1
PKP4-214ENST00000492496 MFSD10Q14728 455 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 FAM177A1Q8N128 213 aaPredicted RBP18.22■□□□□ 0.51
PKP4-214ENST00000492496 REXO1Q8N1G1 1221 aaKnown RBP18.22■□□□□ 0.51
PKP4-214ENST00000492496 PGBD1Q96JS3 809 aa18.22■□□□□ 0.51
PKP4-214ENST00000492496 MXRA8Q9BRK3 442 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms