RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 MRPL12P52815 198 aaKnown RBP13.84□□□□□ -0.19
HMGN1-220ENST00000492280 KLRC3Q07444 240 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
HMGN1-220ENST00000492280 LRRC55Q6ZSA7 311 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 GPBP1Q86WP2 473 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 GPR161Q8N6U8 529 aaKnown RBP13.84□□□□□ -0.19
HMGN1-220ENST00000492280 JAKMIP2Q96AA8 810 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 PRMT6Q96LA8 375 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-220ENST00000492280 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-220ENST00000492280 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 MAGEF1Q9HAY2 307 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 FAM53CQ9NYF3 392 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 LRRC53A6NM62 1247 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 TRAF5O00463 557 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 MEIS2O14770 477 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 NDUFB10O96000 172 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 DNA2P51530 1060 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 CASP5P51878 434 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 KCTD19Q17RG1 926 aaPredicted RBP13.84□□□□□ -0.19
HMGN1-220ENST00000492280 RRAGAQ7L523 313 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 DNAAF5Q86Y56 855 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 TBC1D5Q92609 795 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 ZDHHC15Q96MV8 337 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 RAB34Q9BZG1 259 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 PANK4Q9NVE7 773 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 ARHGAP20Q9P2F6 1191 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 STK17AQ9UEE5 414 aa13.84□□□□□ -0.19
HMGN1-220ENST00000492280 VSNL1P62760 191 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 AMPD2Q01433 879 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 ARID5AQ03989 594 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 PABPC4Q13310 644 aaKnown RBP eCLIP13.83□□□□□ -0.24e-10■□□□□ 10.7
HMGN1-220ENST00000492280 VWA3BQ502W6 1294 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 KIAA1755Q5JYT7 1200 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 FKBP15Q5T1M5 1219 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 GSPT2Q8IYD1 628 aaKnown RBP13.83□□□□□ -0.2
HMGN1-220ENST00000492280 RABGGTAQ92696 567 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 EHD2Q9NZN4 543 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 FAM86B1E9PN63 330 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 FAM86B2P0C5J1 330 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 FAM26FQ5R3K3 315 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 MMS19Q96T76 1030 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 MYO6Q9UM54 1294 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 ATF5Q9Y2D1 282 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-220ENST00000492280 CAPN6Q9Y6Q1 641 aa13.83□□□□□ -0.2
HMGN1-220ENST00000492280 YDJCA8MPS7 323 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 hCG_1984214I3L0E3 225 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 KRT18P05783 430 aaKnown RBP13.82□□□□□ -0.2
HMGN1-220ENST00000492280 PLA2G4BP0C869 781 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 ZBED6P86452 979 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 LONRF2Q1L5Z9 754 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 ABCB5Q2M3G0 1257 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 HERC4Q5GLZ8 1057 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-220ENST00000492280 PPP4R3AQ6IN85 833 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 ZNF713Q8N859 430 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-220ENST00000492280 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 SIK3Q9Y2K2 1263 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 SUGT1Q9Y2Z0 365 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 RSPH10B2B2RC85 870 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 CHMP2AO43633 222 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 C21orf2O43822 256 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 RSPH10BP0C881 870 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 ARHGAP4P98171 946 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 TERF2Q15554 542 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 MEA1Q16626 185 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 CCDC40Q4G0X9 1142 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 PODNQ7Z5L7 613 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 FAM114A1Q8IWE2 563 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 ACER1Q8TDN7 264 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 ARFGAP3Q9NP61 516 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 ZNHIT6Q9NWK9 470 aaKnown RBP13.82□□□□□ -0.2
HMGN1-220ENST00000492280 PI4KBQ9UBF8 816 aa13.82□□□□□ -0.2
HMGN1-220ENST00000492280 ZBTB12Q9Y330 459 aaPredicted RBP13.82□□□□□ -0.2
HMGN1-220ENST00000492280 CTAGE15A4D2H0 777 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 RAD17O75943 681 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 CTAGE8P0CG41 777 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 CXCR5P32302 372 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
HMGN1-220ENST00000492280 CTAGE6Q86UF2 777 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 CTAGE4Q8IX94 777 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 MYOCDQ8IZQ8 938 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 GUF1Q8N442 669 aaKnown RBP13.81□□□□□ -0.2
HMGN1-220ENST00000492280 MTMR8Q96EF0 704 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 CCDC42Q96M95 316 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 ABCB6Q9NP58 842 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 SFI1A8K8P3 1242 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 ZBTB39O15060 712 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 MOCS3O95396 460 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 POLD1P28340 1107 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 OAS2P29728 719 aaKnown RBP13.81□□□□□ -0.2
HMGN1-220ENST00000492280 GFPT1Q06210 699 aaPredicted RBP13.81□□□□□ -0.2
HMGN1-220ENST00000492280 EHHADHQ08426 723 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 PDIA5Q14554 519 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 PTPROQ16827 1216 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 CCDC174Q6PII3 467 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 NOC3LQ8WTT2 800 aaKnown RBP13.81□□□□□ -0.2
HMGN1-220ENST00000492280 ERGIC2Q96RQ1 377 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 FUT8Q9BYC5 575 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 DEF6Q9H4E7 631 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 PLEKHA4Q9H4M7 779 aa13.81□□□□□ -0.2
HMGN1-220ENST00000492280 H0YIN7 160 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms