RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 CPA4Q9UI42 421 aa25.61■■□□□ 1.69
USF3-203ENST00000491165 ERCC3P19447 782 aa25.6■■□□□ 1.69
USF3-203ENST00000491165 TOB1P50616 345 aaPredicted RBP25.6■■□□□ 1.69
USF3-203ENST00000491165 MRPL12P52815 198 aaKnown RBP25.6■■□□□ 1.69
USF3-203ENST00000491165 CRHR2Q13324 411 aa25.6■■□□□ 1.69
USF3-203ENST00000491165 ZCCHC17Q9NP64 241 aaKnown RBP25.6■■□□□ 1.69
USF3-203ENST00000491165 SLU7O95391 586 aaKnown RBP25.6■■□□□ 1.69
USF3-203ENST00000491165 SLC30A10Q6XR72 485 aa25.6■■□□□ 1.69
USF3-203ENST00000491165 KCNH3Q9ULD8 1083 aa25.6■■□□□ 1.69
USF3-203ENST00000491165 PIK3CDO00329 1044 aa25.59■■□□□ 1.69
USF3-203ENST00000491165 EDIL3O43854 480 aa25.59■■□□□ 1.69
USF3-203ENST00000491165 TUBB4AP04350 444 aa25.59■■□□□ 1.69
USF3-203ENST00000491165 TRAF1Q13077 416 aa25.59■■□□□ 1.69
USF3-203ENST00000491165 KRBA2Q6ZNG9 492 aa25.59■■□□□ 1.69
USF3-203ENST00000491165 NCAPG2Q86XI2 1143 aa25.59■■□□□ 1.69
USF3-203ENST00000491165 CNNM3Q8NE01 707 aa25.59■■□□□ 1.69
USF3-203ENST00000491165 THSD7BQ9C0I4 1608 aa25.59■■□□□ 1.69
USF3-203ENST00000491165 SERPINC1P01008 464 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 GCLCP48506 637 aaPredicted RBP25.58■■□□□ 1.69
USF3-203ENST00000491165 HSD17B4P51659 736 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 UBASH3AP57075 661 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 C1QTNF8P60827 252 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 RPS6P62753 249 aaKnown RBP25.58■■□□□ 1.69
USF3-203ENST00000491165 NSMFQ6X4W1 530 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 KRI1Q8N9T8 703 aaKnown RBP25.58■■□□□ 1.69
USF3-203ENST00000491165 EFCC1Q9HA90 598 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 A1CFQ9NQ94 594 aaKnown RBP25.58■■□□□ 1.69
USF3-203ENST00000491165 MORF4L1Q9UBU8 362 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 BRCA2P51587 3418 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 LONRF3Q496Y0 759 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 ZNF397Q8NF99 534 aaPredicted RBP25.58■■□□□ 1.69
USF3-203ENST00000491165 GPRC5AQ8NFJ5 357 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 GTPBP4Q9BZE4 634 aaKnown RBP25.58■■□□□ 1.69
USF3-203ENST00000491165 ACAD9Q9H845 621 aa25.58■■□□□ 1.69
USF3-203ENST00000491165 ZNFX1Q9P2E3 1918 aaKnown RBP25.58■■□□□ 1.68
USF3-203ENST00000491165 CCP110O43303 1012 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 TLR2O60603 784 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 BCRP11274 1271 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 INF2Q27J81 1249 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 FCHSD1Q86WN1 690 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 DOCK3Q8IZD9 2030 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 GCOM1H8Y6P7 765 aaPredicted RBP25.57■■□□□ 1.68
USF3-203ENST00000491165 POLR2MP0CAP2 368 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 GHRHRQ02643 423 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 FAM110CQ1W6H9 321 aa25.57■■□□□ 1.68
USF3-203ENST00000491165 ELOA2Q8IYF1 753 aaPredicted RBP25.57■■□□□ 1.68
USF3-203ENST00000491165 GTF3C2Q8WUA4 911 aaPredicted RBP25.57■■□□□ 1.68
USF3-203ENST00000491165 HOOK1Q9UJC3 728 aaKnown RBP25.57■■□□□ 1.68
USF3-203ENST00000491165 BAATQ14032 418 aaPredicted RBP25.56■■□□□ 1.68
USF3-203ENST00000491165 C17orf99Q6UX52 265 aa25.56■■□□□ 1.68
USF3-203ENST00000491165 DDX41Q9UJV9 622 aaKnown RBP25.56■■□□□ 1.68
USF3-203ENST00000491165 PNMA2Q9UL42 364 aa25.56■■□□□ 1.68
USF3-203ENST00000491165 CCDC194A0A1B0GVG4 234 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 ECM2O94769 699 aaPredicted RBP25.55■■□□□ 1.68
USF3-203ENST00000491165 HSPA6P17066 643 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 RNF207Q6ZRF8 634 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 TBCKQ8TEA7 893 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 L2HGDHQ9H9P8 463 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 CYP39A1Q9NYL5 469 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 PCDHA5Q9Y5H7 936 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 PLXNB2O15031 1838 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 ZSWIM8A7E2V4 1837 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 ATP2B1P20020 1258 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 TKFCQ3LXA3 575 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 CHST13Q8NET6 341 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 SYTL5Q8TDW5 730 aaPredicted RBP25.55■■□□□ 1.68
USF3-203ENST00000491165 ANO3Q9BYT9 981 aa25.55■■□□□ 1.68
USF3-203ENST00000491165 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.55■■□□□ 1.68
USF3-203ENST00000491165 V9GYY5 206 aaPredicted RBP25.55■■□□□ 1.68
USF3-203ENST00000491165 CA12O43570 354 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 SYT10Q6XYQ8 523 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 MCF2L2Q86YR7 1114 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 GLT8D2Q9H1C3 349 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 UBXN2AP68543 259 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 KRT25Q7Z3Z0 450 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 VSTM4Q8IW00 320 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 ZFYVE28Q9HCC9 887 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 PCDHB6Q9Y5E3 794 aa25.54■■□□□ 1.68
USF3-203ENST00000491165 SLC25A27O95847 323 aa25.53■■□□□ 1.68
USF3-203ENST00000491165 MAP2K2P36507 400 aa25.53■■□□□ 1.68
USF3-203ENST00000491165 NONOQ15233 471 aaKnown RBP eCLIP25.53■■□□□ 1.68
USF3-203ENST00000491165 ELF2Q15723 593 aa25.53■■□□□ 1.68
USF3-203ENST00000491165 WDR78Q5VTH9 848 aa25.53■■□□□ 1.68
USF3-203ENST00000491165 CRYGNQ8WXF5 182 aa25.53■■□□□ 1.68
USF3-203ENST00000491165 ASTN1O14525 1302 aa25.53■■□□□ 1.68
USF3-203ENST00000491165 KMT5BQ4FZB7 885 aa25.52■■□□□ 1.68
USF3-203ENST00000491165 RILPL1Q5EBL4 403 aa25.52■■□□□ 1.68
USF3-203ENST00000491165 TAAR1Q96RJ0 339 aa25.52■■□□□ 1.68
USF3-203ENST00000491165 FANCLQ9NW38 375 aa25.52■■□□□ 1.68
USF3-203ENST00000491165 SPDYE3A6NKU9 549 aa25.52■■□□□ 1.68
USF3-203ENST00000491165 MDM2Q00987 491 aaPredicted RBP25.52■■□□□ 1.68
USF3-203ENST00000491165 AP3B2Q13367 1082 aa25.52■■□□□ 1.68
USF3-203ENST00000491165 CNTN2Q02246 1040 aa25.51■■□□□ 1.67
USF3-203ENST00000491165 ANKRD35Q8N283 1001 aa25.51■■□□□ 1.67
USF3-203ENST00000491165 TMX1Q9H3N1 280 aa25.51■■□□□ 1.67
USF3-203ENST00000491165 TBC1D8O95759 1140 aa25.51■■□□□ 1.67
USF3-203ENST00000491165 PTPREP23469 700 aa25.51■■□□□ 1.67
USF3-203ENST00000491165 SHCBP1Q8NEM2 672 aa25.51■■□□□ 1.67
USF3-203ENST00000491165 ZFP91Q96JP5 570 aaPredicted RBP25.51■■□□□ 1.67
USF3-203ENST00000491165 FBXO40Q9UH90 709 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms