RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 LRCH2Q5VUJ6 765 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 NCAPG2Q86XI2 1143 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 CATSPER3Q86XQ3 398 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 KBTBD4Q9NVX7 518 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 GTPBP6O43824 516 aaPredicted RBP15.63■□□□□ 0.09
SMPD4-219ENST00000491128 CTTNQ14247 550 aaKnown RBP15.63■□□□□ 0.09
SMPD4-219ENST00000491128 PGM5Q15124 567 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 WDR78Q5VTH9 848 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 SLFN12Q8IYM2 578 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 EEF2KMTQ96G04 330 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 KCNH7Q9NS40 1196 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 VAV3Q9UKW4 847 aa15.63■□□□□ 0.09
SMPD4-219ENST00000491128 MYMKA6NI61 221 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 HERVK_113P62684 666 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 PPIL2Q13356 520 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 KMT5BQ4FZB7 885 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 LBX2Q6XYB7 198 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 ZNF830Q96NB3 372 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-219ENST00000491128 FANCLQ9NW38 375 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 ATP9AO75110 1047 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 ASIC1P78348 528 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 CST9Q5W186 159 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 MCTP2Q6DN12 878 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 MOXD1Q6UVY6 613 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 ELOA2Q8IYF1 753 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-219ENST00000491128 LARP4BQ92615 738 aaKnown RBP15.62■□□□□ 0.09
SMPD4-219ENST00000491128 CCDC34Q96HJ3 373 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 PPP1R9BQ96SB3 815 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 NAP1L4Q99733 375 aaKnown RBP15.62■□□□□ 0.09
SMPD4-219ENST00000491128 MXRA8Q9BRK3 442 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 PDCD2LQ9BRP1 358 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 HSD3B7Q9H2F3 369 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 GBA2Q9HCG7 927 aaPredicted RBP15.62■□□□□ 0.09
SMPD4-219ENST00000491128 PXMP2Q9NR77 195 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 CYP39A1Q9NYL5 469 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 TELO2Q9Y4R8 837 aa15.62■□□□□ 0.09
SMPD4-219ENST00000491128 IPO5O00410 1097 aaKnown RBP15.61■□□□□ 0.09
SMPD4-219ENST00000491128 FCER1AP12319 257 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 GPAT2Q6NUI2 795 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 OTOP1Q7RTM1 612 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 ANKRD35Q8N283 1001 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 PIGOQ8TEQ8 1089 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 PDLIM2Q96JY6 352 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 TRIM9Q9C026 710 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 AGTPBP1Q9UPW5 1226 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 KCNH4Q9UQ05 1017 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 RLFQ13129 1914 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 CXCL11O14625 94 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 KLRC4O43908 158 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 GAS7O60861 476 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 SPATA31C1P0DKV0 1188 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 IDEP14735 1019 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 SP4Q02446 784 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 PABPC4Q13310 644 aaKnown RBP eCLIP15.61■□□□□ 0.093e-6■□□□□ 9
SMPD4-219ENST00000491128 SV2BQ7L1I2 683 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 RAD54LQ92698 747 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 GSDMAQ96QA5 445 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 SH2D3AQ9BRG2 576 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 ACAD9Q9H845 621 aa15.61■□□□□ 0.09
SMPD4-219ENST00000491128 PSMD10O75832 226 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 PGK2P07205 417 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 ITGB3BPQ13352 177 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-219ENST00000491128 TKFCQ3LXA3 575 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 TPH2Q8IWU9 490 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 PROCA1Q8NCQ7 364 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-219ENST00000491128 FAM20AQ96MK3 541 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 SPATC1LQ9H0A9 340 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 UNC45AQ9H3U1 944 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 EHMT1Q9H9B1 1298 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 RBPJLQ9UBG7 517 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 RPTORQ8N122 1335 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 COL11A1P12107 1806 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-219ENST00000491128 PPP1R3GB7ZBB8 358 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 CNMDO75829 334 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 HOXA7P31268 230 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-219ENST00000491128 MTMR1Q13613 665 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 GLIS3Q8NEA6 775 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 DYDC2Q96IM9 177 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 EIF2AK1Q9BQI3 630 aaKnown RBP15.6■□□□□ 0.09
SMPD4-219ENST00000491128 MOV10L1Q9BXT6 1211 aaKnown RBP15.6■□□□□ 0.09
SMPD4-219ENST00000491128 SAMSN1Q9NSI8 373 aaKnown RBP15.6■□□□□ 0.09
SMPD4-219ENST00000491128 TBC1D7Q9P0N9 293 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 WRAP73Q9P2S5 460 aaPredicted RBP15.6■□□□□ 0.09
SMPD4-219ENST00000491128 NRBP1Q9UHY1 535 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 CTNND2Q9UQB3 1225 aa15.6■□□□□ 0.09
SMPD4-219ENST00000491128 ASTN1O14525 1302 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 SCN4AP35499 1836 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 PTMAP06454 111 aaKnown RBP15.59■□□□□ 0.09
SMPD4-219ENST00000491128 NR3C2P08235 984 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 ERCC3P19447 782 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 TMEM119Q4V9L6 283 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 EEPD1Q7L9B9 569 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 CREBRFQ8IUR6 639 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 BANK1Q8NDB2 785 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 DDX12PQ92771 950 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 TRIM44Q96DX7 344 aaPredicted RBP15.59■□□□□ 0.09
SMPD4-219ENST00000491128 PYM1Q9BRP8 204 aaKnown RBP15.59■□□□□ 0.09
SMPD4-219ENST00000491128 TRIM49BA6NDI0 452 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 FDX1P10109 184 aa15.59■□□□□ 0.09
SMPD4-219ENST00000491128 PRCPP42785 496 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms