RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 LSAMPQ13449 338 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 PUM1Q14671 1186 aaKnown RBP eCLIP2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 ZNF827Q17R98 1081 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 INF2Q27J81 1249 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 RGL3Q3MIN7 710 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 USP53Q70EK8 1073 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 EEPD1Q7L9B9 569 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 PPIL6Q8IXY8 311 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 FAM26EQ8N5C1 309 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 CXorf38Q8TB03 319 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 SEC14L1Q92503 715 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 TOE1Q96GM8 510 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 BORCS6Q96GS4 357 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 TEPSINQ96N21 525 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 NOX5Q96PH1 765 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 MMP19Q99542 508 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 NKX2-4Q9H2Z4 354 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 NGRNQ9NPE2 291 aaKnown RBP2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 PLA2G2DQ9UNK4 145 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 FGD5Q6ZNL6 1462 aa2.69□□□□□ -1.98
SNRNP40-207ENST00000491106 NPEPPSL1A6NEC2 478 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 KRIT1O00522 736 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 PRICKLE3O43900 615 aaPredicted RBP2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 B4GALT4O60513 344 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 CYP7B1O75881 506 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 FBXO21O94952 628 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 PLA2G1BP04054 148 aaKnown RBP2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 GJA8P48165 433 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 GRIN1Q05586 938 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 SF1Q15637 639 aaKnown RBP2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 PRSS53Q2L4Q9 553 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 ZXDCQ2QGD7 858 aaPredicted RBP2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 LCE4AQ5TA78 99 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 MROH9Q5TGP6 573 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 STEAP3Q658P3 488 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 LIPIQ6XZB0 460 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 SAPCD2Q86UD0 394 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 TRIM59Q8IWR1 403 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 FAM9BQ8IZU0 186 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 TTLL6Q8N841 843 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 KYQ8NBH2 561 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 TP53I13Q8NBR0 393 aaPredicted RBP2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 WDR48Q8TAF3 677 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 PLEKHO2Q8TD55 490 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 FRS2Q8WU20 508 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 KCTD13Q8WZ19 329 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 TSPAN17Q96FV3 270 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 LCORQ96JN0 433 aaPredicted RBP2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 ZSWIM3Q96MP5 696 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 CLIC6Q96NY7 704 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 SYT3Q9BQG1 590 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 MTA3Q9BTC8 594 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 JAM3Q9BX67 310 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 KRTAP4-7Q9BYR0 210 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 DEF6Q9H4E7 631 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 RTEL1Q9NZ71 1219 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 KIAA1522Q9P206 1035 aaPredicted RBP2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 NUB1Q9Y5A7 615 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 MTUS2Q5JR59 1369 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 PHLDB1Q86UU1 1377 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 MAPKBP1O60336 1514 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 WASHC2AQ641Q2 1341 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 WASHC2CQ9Y4E1 1318 aa2.68□□□□□ -1.98
SNRNP40-207ENST00000491106 IQCA1LA6NCM1 817 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 MROH6A6NGR9 719 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 UNCXA6NJT0 531 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 B2RBV5 119 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 SGSM2O43147 1006 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 PRODHO43272 600 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 SUSD5O60279 629 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 GJB6O95452 261 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 COL6A2P12110 1019 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 IGFBP6P24592 240 aaPredicted RBP2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 LTBRP36941 435 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 CEBPAP49715 358 aaPredicted RBP2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 KCNAB2Q13303 367 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 HSP90AA2PQ14568 343 aaPredicted RBP2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 RALBP1Q15311 655 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 SKOR2Q2VWA4 1001 aaPredicted RBP2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 SPATS1Q496A3 300 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 E4F1Q66K89 784 aaPredicted RBP2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 TRMT10BQ6PF06 316 aaKnown RBP2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 TMC5Q6UXY8 1006 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 ANKS3Q6ZW76 656 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 LGI4Q8N135 537 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 PNISRQ8TF01 805 aaKnown RBP2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 CPA5Q8WXQ8 436 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 DPF3Q92784 378 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 COPS5Q92905 334 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 CDC6Q99741 560 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 GORASP1Q9BQQ3 440 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 C11orf84Q9BUA3 381 aaPredicted RBP2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 TMEM168Q9H0V1 697 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 RRP7BPQ9NSQ0 103 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 USP35Q9P2H5 1018 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 FBLN5Q9UBX5 448 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 FTSJ1Q9UET6 329 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 PRKAG3Q9UGI9 489 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 PCDHB4Q9Y5E5 795 aa2.67□□□□□ -1.98
SNRNP40-207ENST00000491106 HFM1A2PYH4 1435 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms