RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 PP2D1A8MPX8 630 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 ATP8B1O43520 1251 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 COBLO75128 1261 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 NDUFA10O95299 355 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 AFPP02771 609 aaKnown RBP8.09□□□□□ -1.11
NPHP3-208ENST00000490993 PSMC2P35998 433 aaKnown RBP8.09□□□□□ -1.11
NPHP3-208ENST00000490993 PDE4CQ08493 712 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 GOLGA8FQ08AF8 430 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 GOLGA8DPQ0D2H9 430 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 STRN3Q13033 797 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 NAALADL2Q58DX5 795 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 FAM83BQ5T0W9 1011 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 TMEM206Q9H813 350 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 ADD3Q9UEY8 706 aaKnown RBP8.09□□□□□ -1.11
NPHP3-208ENST00000490993 PPP1R3GB7ZBB8 358 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 OPA1O60313 960 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 HSF2BPO75031 334 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 GTF2F1P35269 517 aaKnown RBP eCLIP8.09□□□□□ -1.11
NPHP3-208ENST00000490993 CYP4A11Q02928 519 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 COASYQ13057 564 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 C10orf76Q5T2E6 689 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 CCDC155Q8N6L0 562 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 DPF2Q92785 391 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 EDEM3Q9BZQ6 932 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 LRRC4BQ9NT99 713 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 RASAL2Q9UJF2 1139 aa8.09□□□□□ -1.11
NPHP3-208ENST00000490993 RHOXF2BP0C7M4 288 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 TCP1P17987 556 aaKnown RBP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 TAF3Q5VWG9 929 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 TTBK2Q6IQ55 1244 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 SRGAP1Q7Z6B7 1085 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 GMCL1P1Q8NEA9 526 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 AGBL3Q8NEM8 1001 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 UIMC1Q96RL1 719 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 RHOXF2Q9BQY4 288 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 PARVGQ9HBI0 331 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 SYNPO2Q9UMS6 1093 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 PHACTR2O75167 634 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 STAT1P42224 750 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 PRELPP51888 382 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 VAV2P52735 878 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 EN1Q05925 392 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 EXOC3L4Q17RC7 722 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 WDR44Q5JSH3 913 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 PDXDC2PQ6P474 469 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 PTF1AQ7RTS3 328 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 CTNNBL1Q8WYA6 563 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 TMEM60Q9H2L4 133 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 NLRC4Q9NPP4 1024 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 ZNF70Q9UC06 446 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 HYOU1Q9Y4L1 999 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 CSADQ9Y600 493 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 K7ENM7 598 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 ZBTB22O15209 634 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 AP5Z1O43299 807 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 NDUFB10O96000 172 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 CCND2P30279 289 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 POLR2FP61218 127 aaKnown RBP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 LRRC41Q15345 812 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 CFAP221Q4G0U5 840 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 ODR4Q5SWX8 454 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 CDAN1Q8IWY9 1227 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 SCLT1Q96NL6 688 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 IDI2Q9BXS1 227 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 SEL1LQ9UBV2 794 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 TRIM49BA6NDI0 452 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 FAM196BA6NMK8 535 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 HOXA13P31271 388 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 HLTFQ14527 1009 aaKnown RBP eCLIP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 NCAPHQ15003 741 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 KIAA0753Q2KHM9 967 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 ATP6V0A1Q93050 837 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 GMCL1Q96IK5 515 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 FNBP1Q96RU3 617 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 ZNF341Q9BYN7 854 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 NHEJ1Q9H9Q4 299 aaPredicted RBP8.08□□□□□ -1.12
NPHP3-208ENST00000490993 TUFT1Q9NNX1 390 aa8.08□□□□□ -1.12
NPHP3-208ENST00000490993 TESPA1A2RU30 521 aaPredicted RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 POLR3GO15318 223 aaPredicted RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 RHBDL3P58872 404 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 ERCC6LQ2NKX8 1250 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 MIGA2Q7L4E1 593 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 ACCSQ96QU6 501 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 ZNF277Q9NRM2 450 aaPredicted RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 CAPN11Q9UMQ6 739 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 DUOX1Q9NRD9 1551 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 DCAF8L1A6NGE4 600 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 WTIPA6NIX2 430 aaPredicted RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 TEX33O43247 280 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 SERPING1P05155 500 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 FERP16591 822 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 JAK3P52333 1124 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 MDM2Q00987 491 aaPredicted RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 FUT2Q10981 343 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 PRPF4BQ13523 1007 aaKnown RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 SLC35F6Q8N357 371 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 PRPF38AQ8NAV1 312 aaKnown RBP8.07□□□□□ -1.12
NPHP3-208ENST00000490993 LPAR1Q92633 364 aa8.07□□□□□ -1.12
NPHP3-208ENST00000490993 TBC1D22BQ9NU19 505 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms