RNA–Protein interactions for RNA: ENST00000490924.1

VPS41-214, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-214ENST00000490924 AKNAD1Q5T1N1 836 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 METTL16Q86W50 562 aaKnown RBP6.61□□□□□ -1.35
VPS41-214ENST00000490924 HOMER1Q86YM7 354 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 CNGA4Q8IV77 575 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 CEP112Q8N8E3 955 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 MNS1Q8NEH6 495 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 ADAMTS19Q8TE59 1207 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 RUBCNQ92622 972 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 BAG1Q99933 345 aaPredicted RBP6.61□□□□□ -1.35
VPS41-214ENST00000490924 PUS7LQ9H0K6 701 aaKnown RBP6.61□□□□□ -1.35
VPS41-214ENST00000490924 GBP3Q9H0R5 595 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 RBM28Q9NW13 759 aaKnown RBP6.61□□□□□ -1.35
VPS41-214ENST00000490924 TTF2Q9UNY4 1162 aaKnown RBP6.61□□□□□ -1.35
VPS41-214ENST00000490924 PPP2R2CQ9Y2T4 447 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 PPME1Q9Y570 386 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 MRFAP1Q9Y605 127 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 SLC12A7Q9Y666 1083 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 RGPD5Q99666 1765 aa6.61□□□□□ -1.35
VPS41-214ENST00000490924 ZBTB7CA1YPR0 619 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 VWA3AA6NCI4 1184 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 FAM196BA6NMK8 535 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 GOLGA8AA7E2F4 631 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L15C9J2P7 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L10C9JJH3 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L13C9JLJ4 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L12C9JPN9 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L11C9JVI0 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L21D6R901 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L18D6R9N7 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L22D6RA61 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L17D6RBQ6 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L19D6RCP7 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L20D6RJB6 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 SART1O43290 800 aaKnown RBP6.6□□□□□ -1.35
VPS41-214ENST00000490924 PDE8AO60658 829 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 SMNDC1O75940 238 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS41-214ENST00000490924 ALX3O95076 343 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 FGRP09769 529 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 CCDC175P0C221 793 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 LMOD1P29536 600 aaPredicted RBP6.6□□□□□ -1.35
VPS41-214ENST00000490924 PBX1P40424 430 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 MCAMP43121 646 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 USP17L24Q0WX57 530 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 NR1I3Q14994 352 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 ARHGAP29Q52LW3 1261 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 METTL24Q5JXM2 366 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 SLC9C2Q5TAH2 1124 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 CDKAL1Q5VV42 579 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 SPATA1Q5VX52 437 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 TTLL5Q6EMB2 1281 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 SYT10Q6XYQ8 523 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 LDHAL6AQ6ZMR3 332 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 RASGRP2Q7LDG7 609 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 NLRP10Q86W26 655 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 TXLNBQ8N3L3 684 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 TC2NQ8N9U0 490 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 IQUBQ8NA54 791 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 TTLL11Q8NHH1 800 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 GIMAP7Q8NHV1 300 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 GOLGA1Q92805 767 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 SMARCE1Q969G3 411 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 EXOC4Q96A65 974 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 RPGRIP1Q96KN7 1286 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 NSUN5Q96P11 429 aaKnown RBP6.6□□□□□ -1.35
VPS41-214ENST00000490924 ARFGAP3Q9NP61 516 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 ZNF446Q9NWS9 450 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 FBXO2Q9UK22 296 aaPredicted RBP6.6□□□□□ -1.35
VPS41-214ENST00000490924 RAB21Q9UL25 225 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 BCS1LQ9Y276 419 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 FNDC3AQ9Y2H6 1198 aaKnown RBP6.6□□□□□ -1.35
VPS41-214ENST00000490924 PCDHA5Q9Y5H7 936 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 AKAP11Q9UKA4 1901 aa6.6□□□□□ -1.35
VPS41-214ENST00000490924 ERICH2A1L162 156 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 AKR1B15C9JRZ8 316 aaPredicted RBP6.59□□□□□ -1.35
VPS41-214ENST00000490924 J3QW42 95 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 MAP2K7O14733 419 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 DEAF1O75398 565 aaPredicted RBP6.59□□□□□ -1.35
VPS41-214ENST00000490924 LGR5O75473 907 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 ERLIN1O75477 346 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 DDAH1O94760 285 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 CLSTN1O94985 981 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 EGFRP00533 1210 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 SLC5A1P13866 664 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 CASQ1P31415 396 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 SOX18P35713 384 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 IL6STP40189 918 aaPredicted RBP6.59□□□□□ -1.35
VPS41-214ENST00000490924 PPP1R2P41236 205 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 PTK7Q13308 1070 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 WHAMMP3Q1A5X7 153 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 ERCC6LQ2NKX8 1250 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 LONRF3Q496Y0 759 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 FILIP1LQ4L180 1135 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 PARP10Q53GL7 1025 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 TMEM67Q5HYA8 995 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 ARL6IP4Q66PJ3 421 aaKnown RBP6.59□□□□□ -1.35
VPS41-214ENST00000490924 FOXR2Q6PJQ5 311 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 ARHGAP27Q6ZUM4 889 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 ZNF771Q7L3S4 317 aaPredicted RBP6.59□□□□□ -1.35
VPS41-214ENST00000490924 TREML1Q86YW5 311 aa6.59□□□□□ -1.35
VPS41-214ENST00000490924 TMTC1Q8IUR5 882 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms