RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CTTNBP2NLQ9P2B4 639 aa15.82■□□□□ 0.12
ARHGEF39-205ENST00000490638 PROCA1Q8NCQ7 364 aaPredicted RBP15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 IL1R1P14778 569 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 ZNF445P59923 1031 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 OSTNP61366 133 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 ERO1BQ86YB8 467 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 FAM167AQ96KS9 214 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 ACCSQ96QU6 501 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 BCL2L12Q9HB09 334 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 FAM170AA1A519 330 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 N4BP1O75113 896 aaKnown RBP15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 PDHBP11177 359 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 GNAT1P11488 350 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 FKBP3Q00688 224 aaKnown RBP15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 NOLC1Q14978 699 aaKnown RBP eCLIP15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 SMYD4Q8IYR2 804 aaPredicted RBP15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 PODXL2Q9NZ53 605 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 HESX1Q9UBX0 185 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 KIF13AQ9H1H9 1805 aa15.81■□□□□ 0.12
ARHGEF39-205ENST00000490638 CTAGE15A4D2H0 777 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 CLIC2O15247 247 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 CTAGE8P0CG41 777 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 CAP2P40123 477 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 PEX3P56589 373 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 SFMBT2Q5VUG0 894 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 SPATA1Q5VX52 437 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 CTAGE6Q86UF2 777 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 CTAGE4Q8IX94 777 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 MAK16Q9BXY0 300 aaKnown RBP15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 XPO4Q9C0E2 1151 aaKnown RBP15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 FBXO28Q9NVF7 368 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 ABL1P00519 1130 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 CEP55Q53EZ4 464 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 ATG4CQ96DT6 458 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 LSM14BQ9BX40 385 aaKnown RBP15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 PCIF1Q9H4Z3 704 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 TLR3O15455 904 aaKnown RBP15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 TXNP10599 105 aaKnown RBP15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 TM4SF1P30408 202 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 TFAMQ00059 246 aaKnown RBP15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 ACER1Q8TDN7 264 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 IPO4Q8TEX9 1081 aaKnown RBP15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 SIGLEC1Q9BZZ2 1709 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 SFI1A8K8P3 1242 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 SWSAP1Q6NVH7 229 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 CYP26C1Q6V0L0 522 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 DYDC1Q8WWB3 177 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 EMILIN3Q9NT22 766 aa15.8■□□□□ 0.12
ARHGEF39-205ENST00000490638 TDP2O95551 362 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 PTPREP23469 700 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 SPECC1LQ69YQ0 1117 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 KIAA1841Q6NSI8 718 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 MCPH1Q8NEM0 835 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 RRAGCQ9HB90 399 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 DAPK3O43293 454 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 ECE1P42892 770 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 ZNF75DP51815 510 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 PRELPP51888 382 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 PSMD1Q99460 953 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 NUCKS1Q9H1E3 243 aaKnown RBP15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 TMEM206Q9H813 350 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 GABBR1Q9UBS5 961 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 FAM205AQ6ZU69 1335 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 COBLO75128 1261 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 MMP14P50281 582 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 TMTC1Q8IUR5 882 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 BANK1Q8NDB2 785 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 CAPZA3Q96KX2 299 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 SPATA33Q96N06 139 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 RIOK1Q9BRS2 568 aaKnown RBP15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 MED10Q9BTT4 135 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 AGTPBP1Q9UPW5 1226 aa15.79■□□□□ 0.12
ARHGEF39-205ENST00000490638 DDTLA6NHG4 134 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 WNT10BO00744 389 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 CSPG5O95196 566 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 RFX1P22670 979 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 QARSP47897 775 aaKnown RBP15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 ZRSR2Q15696 482 aaKnown RBP15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 FAM186BQ8IYM0 893 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 GPC2Q8N158 579 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 GPRC5AQ8NFJ5 357 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 TIGD1Q96MW7 591 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 RTFDC1Q9BY42 306 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 BCCIPQ9P287 314 aaKnown RBP eCLIP15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 USTQ9Y2C2 406 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 KIF20BQ96Q89 1820 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 FSD2A1L4K1 749 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 LACTBP83111 547 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 ZBTB33Q86T24 672 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 MTUS1Q9ULD2 1270 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 ZKSCAN5Q9Y2L8 839 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 IKBKGQ9Y6K9 419 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 GUCY1A2P33402 732 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 MB21D1Q8N884 522 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 OR8K1Q8NGG5 319 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 DPF2Q92785 391 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 POLD4Q9HCU8 107 aa15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF39-205ENST00000490638 DACT2Q5SW24 774 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms