RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 CHMP4BP1P59074 171 aa20.83■□□□□ 0.93
COL9A3-214ENST00000490398 PFKFB3Q16875 520 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-214ENST00000490398 HSDL1Q3SXM5 330 aa20.83■□□□□ 0.93
COL9A3-214ENST00000490398 CELF3Q5SZQ8 465 aaKnown RBP20.83■□□□□ 0.93
COL9A3-214ENST00000490398 PCNX4Q63HM2 1172 aa20.83■□□□□ 0.93
COL9A3-214ENST00000490398 DHX37Q8IY37 1157 aaKnown RBP20.83■□□□□ 0.93
COL9A3-214ENST00000490398 ALDH8A1Q9H2A2 487 aaPredicted RBP20.83■□□□□ 0.93
COL9A3-214ENST00000490398 RIC8AQ9NPQ8 531 aa20.83■□□□□ 0.93
COL9A3-214ENST00000490398 SMCO2A6NFE2 343 aa20.82■□□□□ 0.92
COL9A3-214ENST00000490398 SPATA31C2B4DYI2 1134 aa20.82■□□□□ 0.92
COL9A3-214ENST00000490398 TIMP1P01033 207 aa20.82■□□□□ 0.92
COL9A3-214ENST00000490398 ICAM3P32942 547 aa20.82■□□□□ 0.92
COL9A3-214ENST00000490398 CYP2C18P33260 490 aa20.82■□□□□ 0.92
COL9A3-214ENST00000490398 LAMC2Q13753 1193 aa20.82■□□□□ 0.92
COL9A3-214ENST00000490398 SHHQ15465 462 aa20.82■□□□□ 0.92
COL9A3-214ENST00000490398 PDRG1Q9NUG6 133 aa20.82■□□□□ 0.92
COL9A3-214ENST00000490398 TLR3O15455 904 aaKnown RBP20.81■□□□□ 0.92
COL9A3-214ENST00000490398 PRPF3O43395 683 aaKnown RBP20.81■□□□□ 0.92
COL9A3-214ENST00000490398 ZNF286BP0CG31 522 aa20.81■□□□□ 0.92
COL9A3-214ENST00000490398 CYP2C9P11712 490 aa20.81■□□□□ 0.92
COL9A3-214ENST00000490398 SCG2P13521 617 aa20.81■□□□□ 0.92
COL9A3-214ENST00000490398 ITGB5P18084 799 aa20.81■□□□□ 0.92
COL9A3-214ENST00000490398 STK3Q13188 491 aa20.81■□□□□ 0.92
COL9A3-214ENST00000490398 BRDTQ58F21 947 aaPredicted RBP20.81■□□□□ 0.92
COL9A3-214ENST00000490398 PPP1R18Q6NYC8 613 aa20.81■□□□□ 0.92
COL9A3-214ENST00000490398 SCN10AQ9Y5Y9 1956 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 CCDC196A0A1B0GTZ2 297 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 KPNA6O60684 536 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 ATP9AO75110 1047 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 IFNAR1P17181 557 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 CLK2P49760 499 aaKnown RBP20.8■□□□□ 0.92
COL9A3-214ENST00000490398 ADCY7P51828 1080 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 FAM47CQ5HY64 1035 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 C16orf59Q7L2K0 433 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 PPTC7Q8NI37 304 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 SPATA33Q96N06 139 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 SLC26A6Q9BXS9 759 aa20.8■□□□□ 0.92
COL9A3-214ENST00000490398 SPDYE3A6NKU9 549 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 FIBPO43427 364 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 TGFB3P10600 412 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 HOXD8P13378 290 aaPredicted RBP20.79■□□□□ 0.92
COL9A3-214ENST00000490398 DGKDQ16760 1214 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 GNPTABQ3T906 1256 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 MFSD5Q6N075 450 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 KCNV1Q6PIU1 500 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 CYFIP1Q7L576 1253 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 CYP2W1Q8TAV3 490 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 CTAGE1Q96RT6 745 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 NOC4LQ9BVI4 516 aaKnown RBP20.79■□□□□ 0.92
COL9A3-214ENST00000490398 UBIAD1Q9Y5Z9 338 aa20.79■□□□□ 0.92
COL9A3-214ENST00000490398 STAM2O75886 525 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 CSF2RAP15509 400 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 PSEN2P49810 448 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 CCL23P55773 120 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 FPGSQ05932 587 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 HIC1Q14526 733 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 LRIT3Q3SXY7 679 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 JAKMIP3Q5VZ66 844 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 XRRA1Q6P2D8 792 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 VWCEQ96DN2 955 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 ZNF274Q96GC6 653 aaPredicted RBP20.78■□□□□ 0.92
COL9A3-214ENST00000490398 ALG1Q9BT22 464 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 WNT8AQ9H1J5 351 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 MLXIPQ9HAP2 919 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 PKD2L1Q9P0L9 805 aa20.78■□□□□ 0.92
COL9A3-214ENST00000490398 hCG_1984214I3L0E3 225 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 HAS3O00219 553 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 F2P00734 622 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 ACRP10323 421 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 ANAPC15P60006 121 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 C8orf34Q49A92 452 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 GDF6Q6KF10 455 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-214ENST00000490398 NFRKBQ6P4R8 1299 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 ZNF713Q8N859 430 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-214ENST00000490398 IL17RAQ96F46 866 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 C16orf70Q9BSU1 422 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 RNF26Q9BY78 433 aaPredicted RBP20.77■□□□□ 0.92
COL9A3-214ENST00000490398 ANO3Q9BYT9 981 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 HIPK3Q9H422 1215 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 VPS54Q9P1Q0 977 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 TPCN1Q9ULQ1 816 aa20.77■□□□□ 0.92
COL9A3-214ENST00000490398 KCNA2P16389 499 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 AK2P54819 239 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 SP4Q02446 784 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 SCRN1Q12765 414 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 NLRX1Q86UT6 975 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 RASGRP4Q8TDF6 673 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 AIFM3Q96NN9 605 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 SEZ6LQ9BYH1 1024 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 HDAC6Q9UBN7 1215 aa20.76■□□□□ 0.91
COL9A3-214ENST00000490398 PPFIA4O75335 1185 aa20.75■□□□□ 0.91
COL9A3-214ENST00000490398 ZNF200P98182 395 aaPredicted RBP20.75■□□□□ 0.91
COL9A3-214ENST00000490398 MFSD10Q14728 455 aa20.75■□□□□ 0.91
COL9A3-214ENST00000490398 KIAA0753Q2KHM9 967 aa20.75■□□□□ 0.91
COL9A3-214ENST00000490398 METTL7BQ6UX53 244 aa20.75■□□□□ 0.91
COL9A3-214ENST00000490398 GPRASP2Q96D09 838 aa20.75■□□□□ 0.91
COL9A3-214ENST00000490398 SCLYQ96I15 445 aa20.75■□□□□ 0.91
COL9A3-214ENST00000490398 GPR20Q99678 358 aa20.75■□□□□ 0.91
COL9A3-214ENST00000490398 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.75■□□□□ 0.912e-16■□□□□ 9
COL9A3-214ENST00000490398 ZMYND12Q9H0C1 365 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms