RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 RIOK1Q9BRS2 568 aaKnown RBP8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 CNTNAP3Q9BZ76 1288 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 AP5M1Q9H0R1 490 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 PDGFCQ9NRA1 345 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 CLDND1Q9NY35 253 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 CTNNA3Q9UI47 895 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 Q9Y3F1 56 aa8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 DDX49Q9Y6V7 483 aaKnown RBP8.63□□□□□ -1.03
PDLIM1-203ENST00000490391 STXBP3O00186 592 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 CXCL10P02778 98 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 ZAP70P43403 619 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 MTX1Q13505 466 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 CBX2Q14781 532 aaPredicted RBP8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 CLUL1Q15846 466 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 PTPROQ16827 1216 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 LRRFIP1Q32MZ4 808 aaKnown RBP8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 EPC2Q52LR7 807 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 FAM83BQ5T0W9 1011 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 MRPL14Q6P1L8 145 aaKnown RBP8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 PPP1R13LQ8WUF5 828 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 SSH1Q8WYL5 1049 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 CTAGE1Q96RT6 745 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 NSUN3Q9H649 340 aaKnown RBP8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 LCTP09848 1927 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 NLRC5Q86WI3 1866 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 FRYQ5TBA9 3013 aa8.62□□□□□ -1.03
PDLIM1-203ENST00000490391 GREB1LQ9C091 1923 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 SOBPA7XYQ1 873 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 LOC730098B7Z3J9 87 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 H3BNC9 293 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 SRGAP3O43295 1099 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 TBX10O75333 385 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 POLR3DP05423 398 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 CYP2D6P10635 497 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 EEF2P13639 858 aaKnown RBP8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 HTRA4P83105 476 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 SIGLEC14Q08ET2 396 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 SMAD4Q13485 552 aaKnown RBP8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 BFSP2Q13515 415 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 NBPF20Q3BBV1 942 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 CNKSR3Q6P9H4 555 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 EP400NLQ6ZTU2 488 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 ANKRD35Q8N283 1001 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 RETREG2Q8NC44 543 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 RMDN1Q96DB5 314 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 DYNLL2Q96FJ2 89 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 ZNF512BQ96KM6 892 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 NUP88Q99567 741 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 SLF1Q9BQI6 1058 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 DNMT3AQ9Y6K1 912 aaPredicted RBP8.61□□□□□ -1.03
PDLIM1-203ENST00000490391 ABHD14A-ACY1A0A1B0GW23 586 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 NBNO60934 754 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 PDGFBP01127 241 aaPredicted RBP8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 HYAL1Q12794 435 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 TTC39AQ5SRH9 613 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 IQSEC1Q6DN90 963 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 FAM117BQ6P1L5 589 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 NFRKBQ6P4R8 1299 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 FBXO16Q8IX29 292 aaPredicted RBP8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 ADSSL1Q8N142 457 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 CHST13Q8NET6 341 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 AFAP1L1Q8TED9 768 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 PURBQ96QR8 312 aaKnown RBP8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 MEIS3Q99687 375 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 SLC38A10Q9HBR0 1119 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 POLR3EQ9NVU0 708 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 MCM9Q9NXL9 1143 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 SWAP70Q9UH65 585 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 FBXO40Q9UH90 709 aa8.6□□□□□ -1.03
PDLIM1-203ENST00000490391 MAST4O15021 2626 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 NCK2O43639 380 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 IDH1O75874 414 aaKnown RBP8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 EYA4O95677 639 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 RBL2Q08999 1139 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 GPM6BQ13491 265 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 DUSP28Q4G0W2 176 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 FAM47CQ5HY64 1035 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 FRMD5Q7Z6J6 570 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 CPXCR1Q8N123 301 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 PRPF38AQ8NAV1 312 aaKnown RBP8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 CAGE1Q8TC20 777 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 NLRP7Q8WX94 980 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 DHX38Q92620 1227 aaKnown RBP8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 NKD2Q969F2 451 aaPredicted RBP8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 MSLNLQ96KJ4 702 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 SAMD11Q96NU1 681 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 MTG1Q9BT17 334 aaPredicted RBP8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 KRTAP4-8Q9BYQ9 185 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 RAVER2Q9HCJ3 691 aaKnown RBP8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 DCP1AQ9NPI6 582 aaPredicted RBP8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 A1CFQ9NQ94 594 aaKnown RBP8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 INSL6Q9Y581 213 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 RALGAPA2Q2PPJ7 1873 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 SPEGQ15772 3267 aa8.59□□□□□ -1.03
PDLIM1-203ENST00000490391 BAZ2AQ9UIF9 1905 aaKnown RBP8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 ASB14A6NK59 587 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 LINC01565O15544 149 aa8.58□□□□□ -1.04
PDLIM1-203ENST00000490391 EFCAB14O75071 495 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms